Short Communication
Subject Category: Microbial population and community ecology
The ISME Journal (2009) 3, 498–502; doi:10.1038/ismej.2008.112; published online 20 November 2008
Malassezia furfur fingerprints as possible markers for human phylogeography
George Gaitanis1,2, Aristea Velegraki1, Evangelos C Alexopoulos3, Evangelia Kapsanaki-Gotsi4, Lilia Zisova5, Yuping Ran6, Hao Zhang6, George Arsenis1, Ioannis D Bassukas2 and Jan Faergemann7
- 1Mycology Laboratory, Medical School, National and Kapodistrian University of Athens, Athens, Greece
- 2Department of Skin and Venereal Diseases, Medical School, University of Ioannina, Ioannina, Greece
- 3Department of Public health, Medical School, University of Patras, Patras, Greece
- 4Division of Ecology and Systematics, Biology Department, National and Kapodistrian University of Athens, Athens, Greece
- 5Department of Dermatology and Sexually Transmitted Diseases, Medical University, Plovdiv, Bulgaria
- 6Department of Dermatovenereology, West China Hospital, Sichuan University, Chengdu, PR China
- 7Department of Dermatology, Sahlgrenska University Hospital, SE Goteborg, Sweden
Correspondence: A Velegraki, Mycology Laboratory, Medical School, National and Kapodistrian University of Athens, M Asias 75–77, Goudi, Athens 11527, Greece. E-mail: aveleg@med.uoa.gr
Received 17 July 2008; Revised 2 October 2008; Accepted 8 October 2008; Published online 20 November 2008.
Abstract
Malassezia furfur was the first species described within the cosmopolitan yeast genus Malassezia, which now comprises 13 species. Reported isolation rates of these species from healthy and diseased human skin show geographic variations. PCR-fingerprinting with the wild-type phage M13 primer (5'-GAGGGTGGCGGTTCT-3') was applied to investigate phylogeographic associations of M. furfur strains isolated from Scandinavians residing permanently in Greece, in comparison to clinical isolates from Greek, Bulgarian and Chinese native residents. Seven M. furfur strains from Scandinavians were compared with the Neotype strain (CBS1878), CBS global collection strains (n=10) and clinical isolates from Greece (n=4), Bulgaria (n=15) and China (n=6). Scandinavian, Greek and Bulgarian M. furfur strains mostly formed distinct group clusters, providing initial evidence for an association with the host's geographical origin and with the underlying skin condition. These initial data address the hypothesis that M. furfur could be a eukaryotic candidate eligible for phylogeographic studies.
Keywords:
eukaryote, fingerprinting, phylogeography, Malassezia
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