Abstract
Epiphytic dwarf males on the females present a possible solution to the problem of short fertilization distances in mosses. However, leptokurtic spore dispersal makes dwarf males likely to be closely related to their host shoot, with an accompanying risk of inbreeding. The capacity of a female to harbour a high number of different dwarf males suggests that there may be mechanisms in place that counteract inbreeding, such as polyandry and post-fertilization selection. We have genotyped sporophytes, female host shoots and dwarf males in four populations of the moss Homalothecium lutescens. We found no evidence of selective sporophyte abortion based on level of heterozygosity. The occurrence of entirely homozygous sporophytes together with significantly positive inbreeding coefficients in three of the populations (mean FIS between 0.48 and 0.64) suggest frequent mother–son mating events. However, 23% of all sampled sporophytes had a higher level of heterozygosity compared with the mean expected heterozygosity at the population level. Polyandry was frequent, on average 59% of the sporophytes on a female shoot were sired by distinct fathers. In conclusion, sporadic fertilizations by dwarf males originating from nonhost female shoots appear to counteract strong inbreeding.
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Introduction
Mating with multiple males (that is, polyandry) may have several benefits in plants; it enables pollen competition (Armbruster and Rogers, 2004; Pannell and Labouche, 2013) and post-fertilization selection (Korbecka et al., 2002) as well as increases the genetic diversity of the offspring (Ellstrand and Marshall, 1986; Cornell and Tregenza, 2007). It has also been shown that polyandry may halt the spread of selfish genetic elements (Price et al., 2008). Hence, polyandry may not only prevent inbreeding but also have significant implications for the evolution of mating systems.
In bryophytes, the potential for polyandry may be limited for at least two reasons. First, fertilization mainly occurs between individuals in close proximity as a consequence of short dispersal range of the swimming spermatozoids (Bisang et al., 2004). Hence, the sexual partners are principally limited to the shoots growing in the same colony. Second, local recruitment in bryophytes appears to be restricted by the difficulty of spores to germinate in already established colonies, possibly regulated by chemicals exuded by the mature shoots (Mishler and Newton, 1988; Basile et al., 2003). As a consequence, where disturbance is low, the number of clones that coexist within fertilization distance may be limited (Cronberg et al., 2006, but see for example van der Velde et al., 2001). In vegetatively proliferating perennial species, the genet composition may remain unchanged for many years, leading to few available mating alternatives.
It has been estimated that 10–20% of all moss species (and at least 25% of all dioicous perennial pleurocarpous mosses) are nannandrous (also known as phyllodioicous), meaning that the males are situated as tiny epiphytes on a much larger female shoot (Hedenäs and Bisang, 2011). These so-called ‘dwarf males’ originate from male spores that happen to land on a mature female shoot. After germination the spores form gametophytes restricted to at most a few mm in size that produce male gametangia (antheridia). Dwarf males may readily establish in mature female colonies, sometimes as many as several hundreds per shoot. Having dwarf males may reduce intersexual competition, by giving more space for females to grow. In addition, the dwarf male sexual system is expected to multiply the number of available mating partners to a female shoot and thus increase the potential for outcrossing and polyandry. Bryophytes are the only known sessile land organisms with epiphytic dwarf males, whereas other organisms with similar mating system are mostly found in aquatic habitats (Ghiselin, 1974; Vollrath, 1998).
The female shoots do not appear to be overly selective regarding which male spores are allowed to germinate on them, as demonstrated by the fact that dwarf males may be able to develop on shoots of closely related species (Rosengren and Cronberg, 2015). Because of the leptokurtic distribution of spore dispersal (Sundberg, 2005), the spores that develop into dwarf males are more likely produced by nearby shoots (or even the same shoot) than arriving from a more distant source. Accordingly, it is not clear to what extent the dwarf male sexual system will lead to outcrossing or inbreeding, relative to similar species without dwarf males. If fertilization between the female host shoot and its own male progeny is common, it could eventually lead to high levels of homozygosity in the sporophytes. Consequently, the female shoot and its male progeny (that will become the next generation of dwarf males) may have a high genetic similarity. High levels of inbreeding have been suggested as a potential consequence of the dwarf male sexual system in bryophytes (Mogensen, 1981; Ramsay, 1985; Hedenäs and Bisang, 2011; Pichonet and Gradstein, 2012). Because of the dominant haploid life stage, inbreeding in bryophytes may have more drastic genetic effects compared with diploids. Intragametophytic selfing results in 100% homozygosity, whereas mating between siblings (that is, individuals produced by the same sporophyte, also known as intergametophytic selfing) results in a 50% reduction of heterozygosity, comparable to selfing in vascular plants (Eppley et al., 2007; Taylor et al., 2007).
A selection of different available sexual partners (that may be the case in species with dwarf males) is a precondition for mechanisms that may counteract inbreeding such as sperm competition and/or post-fertilization selection. Because of the fact that bryophytes generally lack morphological structures facilitating sperm competition (for example, a style), post-fertilization selection is the more likely option. In vascular plants, the number of fertilized ovules often exceeds the number of produced seeds (Korbecka et al., 2002). In bryophytes, each perichaetium (female sexual bud) contains several archegonia (Longton, 1962). A single female shoot may have multiple perichaetia, but only exceptionally do more than one sporophyte develop to full maturity from each perichaetium (Longton and Schuster, 1983; Longton, 1994). Sporophyte production has been shown to be resource limited and abortion of sporophytes in an early developmental stage is not uncommon (Hughes, 1979; Stark and Stephenson, 1983; Stark et al., 2000; Ehrlén et al., 2000). A recent study of Sphagnum lescurii showed that females preferentially supported sporophytes with higher heterozygosity in populations with significant spatial genetic structure (Szövényi et al., 2009). If post-fertilization selection based on sporophyte heterozygosity occurs in a moss with dwarf males, the level of heterozygosity in the sporophytes would be higher than what is expected from the available male sexual partners (that is, dwarf males on or nearby the mother shoot).
The main objective of the present study was to investigate whether high levels of inbreeding is a consequence of the dwarf male sexual system, or whether it is counteracted by mechanisms such as polyandry and/or post-fertilization selection. We genotyped female shoots, dwarf males and sporophytes from four populations of the nannandrous moss Homalothecium lutescens and estimated the levels of inbreeding and polyandry. In addition, we tested whether the observed levels of sporophyte heterozygosity were higher than expected from the dwarf males situated on the female host shoots, indicating selective sporophyte abortion.
Materials and methods
Study species
H. lutescens is a perennial pleurocarp that proliferates largely by clonal growth. Large shoots with perigonia (that is, fertile males) are rare; none were found in this study and from the literature they are reported to occur approximately once in several hundred females (Lieske, 2010; Rosengren et al., 2014; Rosengren and Cronberg, 2014). The majority of males are situated on the female shoots as dwarf males, no more than at most a few mm in size. Spore dispersal occurs around February/March and females are fertilized around May/June (Arnell, 1875; Grimme, 1903). It is not entirely known how fast the dwarf males develop after germination, but field observations (F Rosengren) suggest that dwarf males may fertilize the female the same year they were produced (after a couple of months) and/or over winter and fertilize the female the subsequent year. The prevailing opinion is that the dwarf males are unlikely to be able to live more than 1 or 2 years on the large shoots (Sagmo Solli et al., 1998; Hedenäs and Bisang, 2011; Hedenäs and Bisang, 2012). As dwarf males are frequently sterile, their true sexual identity is often unknown (male and female shoots lack distinguishing characters other than the sexual organs). Consequently, it cannot be ruled out that some dwarf plants are actually dwarf females or young ‘normal-sized’ females.
Sites and sampling
Sampling was conducted in November 2012 in four different locations where dwarf males and sporophytes had previously been found in abundance: (1) Arrie ponds (AP, 55°31’15.3”N 13°6’5.7”E), (2) Käglinge ponds (KP, 55°31’57.2”N 13°3’57.6”E), (3) Limhamn quarry (LQ, 55°34’5.7”N 12°55’29.0”E) and (4) Cape Klagshamn (CK, 55°31’21.0”N 12°54’2.8”E). Population AP, KP and CK are located in partly open, partly forested recreational areas. Population LQ is located in a former opencast pit with large areas of open ground but also partly covered by trees and shrubs. All four populations are located in the south of Sweden within an area of ∼60 km2 that mainly consists of arable land and suburban areas around the city of Malmö.
Five colonies (six in population CK) separated by a minimum of 20 m were selected in each of the four populations. The shoots within the selected colonies should bear sporophytes within an area of at least 0.5 m2. One female shoot was sampled from the centre of each colony, including attached sporophytes and dwarf males. A shoot is defined as the greenish part of the moss down to the brown/black part that detaches from the larger clone when picked up from the ground. Each female shoot may carry anything between 0 and several hundreds of dwarf males and up to ∼20 sporophytes.
DNA extraction
DNA extraction was performed with Qiagen (Hilden, Germany) DNeasy Plant MiniKit. Between four and six sporophytes from each female shoot were used for DNA extraction. Between 10 and 20 dwarf males were picked off each female shoot and allowed to grow on agarose plates (with a weak nutrient solution) for 4 months before extraction. In total, DNA extraction was performed for 21 female shoots, 239 dwarf males and 108 sporophytes.
SNP genotyping
Single-nucleotide polymorphism (SNP) extraction from 454 sequenced transcriptome data is described in Supplementary Appendix S1. Potential SNP locus candidates (125) were sent to SciLifeLab (Uppsala, Sweden) who selected 96 SNP loci, based on an Illumina (San Diego, CA, USA) scoring of their functionality and primer designability regarding the GoldenGate assay (Fan et al., 2003). Scores of 0.5–1.0 are required for a high-quality assay. The 96 SNPs selected in the present study had a score of ⩾0.58. A UniProt (UniProt Consortium, 2014) database search of the 96 isotigs containing the target SNPs revealed that none of them were transcribed from the chloroplast genome. DNA samples were sent to SciLifeLab who performed SNP genotyping using the Illumina GoldenGate assay (Fan et al., 2003). In total, 368 samples were sent for genotyping: 21 haploid female gametophytes, 239 haploid dwarf male gametophytes and 108 diploid sporophytes. The haploid SNP genotypes (the combination of alleles in a haploid gametophyte) will hereafter be referred to as haplotypes. The haploid paternal haplotypes of the sporophytes (so-called ‘fathers’) were extracted from the female and sporophyte genotypes. As the diploid sporophyte genotype is a result of fusion between the haploid father and mother genotypes, the father haplotype for each sporophyte was derived by subtracting the mother shoot haplotype from the diploid sporophyte genotype.
Polyandry
To estimate the level of polyandry, we calculated the number of distinct father haplotypes on each female shoot (K) as well as the proportion of the sampled sporophytes that was sired by distinct fathers. Individuals that shared alleles in all loci except for loci with missing data were treated as the same haplotype. In addition, we calculated the effective number of fathers (KE, Bernasconi, 2003) on each female shoot using the following equation KE=1/Σ(pi)2, where pi is the proportion of the sporophytes fertilized by each distinct father haplotype. When the distinct fathers each sire an equal number of sporophytes on a female shoot, the effective number of fathers (KE) will be the same as the number of distinct fathers (K). To get a general estimate of the level of paternity skew, we calculated the mean value of KE/K over all female shoots (Szövényi et al., 2009); this index ranges between 0 (high paternity skew) and 1 (no paternity skew).
Inbreeding
The expected number of heterozygotes in a locus with two alleles may be calculated as 2 × p × q (where p and q are the frequencies of the two alternative alleles). If the allele frequencies in the males and females differ, the expected number of heterozygotes would instead be pmothers × qfathers+pfathers × qmothers. From the genotypes of the sporophytes and the host shoots, we were able to derive allele frequencies in the mothers and the fathers in each population. From these allele frequencies, we calculated expected heterozygosity at the population level for each locus (HEXP). The observed heterozygosity for each locus (HOBS) was derived directly from the sporophyte genotypes. Individuals with missing data were excluded in the calculations of HEXP and HOBS within each locus. Wright’s coefficient of inbreeding (FIS=(HEXP−HOBS)/HEXP) was calculated for all loci that were polymorphic in both mothers and fathers (number of loci in AP=49, KP=40, LQ=21 and CK=40) and the mean FIS within populations was tested against zero in a one-sample t-test in R version 3.1.1 (R Development Core Team, 2005). In addition, the difference in FIS between populations was tested in analysis of variance in R (followed by Tukey’s HSD (honest significant difference) post hoc test).
The observed level of heterozygosity was calculated for each individual sporophyte, excluding loci with missing data (HSP). In each population, the mean expected heterozygosity over the 68 loci was calculated (mean HEXP), corresponding to the overall expected frequency of heterozygous loci in each individual.
Post-fertilization selection test
To test whether sporophytes with a high level of homozygosity had been selectively aborted, we compared the observed level of heterozygosity in the sporophytes on a female shoot (HSP) with the theoretical level of heterozygosity in the sporophytes sired by a random set of potential male sexual partners (the sampled dwarf males hosted by the female shoot) (HTH). The difference between HTH and HSP was tested in a linear mixed effects model with the lmer function (lme4 package) in R statistical package version 3.1.1. The response variable in the model was the level of heterozygosity in the sporophytes. Sporophyte category (two levels: HTH and HSP) was treated as a fixed effect. Population and female host shoot (nested within population) were treated as random effects. The response variable was log-transformed to meet the model assumptions (normal distributed residuals and homogeneity of variances).
Results
SNP genotyping
Of the 96 SNP markers in the GoldenGate assay, 84 resulted in genotyping (that is, allelic data were obtained for at least one individual). However, out of these 84 SNP markers, 13 were monomorphic and 3 failed in >20% of the samples, resulting in a total of 68 polymorphic SNPs that were used in further analyses. All sequences containing the SNPs that were used were annotated to a bryophyte (one to Grimmia pilifera, the rest to Physcomitrella patens). Total proportion of missing data (failed genotyping) was 1.3%. No individual had >10% missing data and no loci had >17% of missing data. The missing data contribute to lower resolution in the genotyping. However, as the number of markers was high (68) and the missing data were more or less evenly distributed among individuals and loci, we do not believe the missing data significantly affected the analyses.
All samples except 30 dwarf males could be SNP genotyped (that is, allelic data were obtained for at least 90% of the 68 loci). In total, 21 female shoots, 209 dwarf males (mean 10.0±2.1 dwarf males per female host shoot, ranging between 5 and 12) and 108 sporophytes (mean 5.1±0.7 per female host shoot, ranging between 4 and 6) were genotyped. Data are given as mean±s.d.
Polyandry
On average, each female shoot hosted (a minimum of) 7.9 distinct dwarf male haplotypes (ranging between 4 and 12), allowing the possibility for polyandry. If we assume that identical father haplotypes derived from sporophytes on two different female shoots (>20 m apart) are unlikely to belong to the same individual, the 108 sampled sporophytes were sired by (a minimum of) 65 distinct fathers. Out of all distinct father haplotypes, 66% were found in only a single sporophyte on the female host, 14% in two, 11% in three, 6% in four and 3% in five sporophytes. At least 18 of the 21 female shoots had been fertilized by more than one male. On three of these shoots, all of the sampled sporophytes (five in each case) had distinct fathers.
On average, 59±25% of the sampled sporophytes on a female shoot were sired by distinct fathers. In raw numbers, the sporophytes on a female shoot (mean sample 5.1±0.7) were on average sired by 3.1±1.4 distinct fathers (K). The mean effective number of fathers (KE) on a female shoot was 2.7±1.4. Paternity skew (KE/K) was estimated to an average of 0.87±0.21.
Inbreeding
The mean inbreeding coefficient FIS was significantly >0 in all populations except for LQ (AP: t(48)=12.75, P<0.001; KP: t(39)=14.07, P<0.001; LQ: t(20)=1.50, P=0.149; CK: t(39)=15.28, P<0.001), and among the populations KP showed highest FIS (0.64) followed by CK (0.59), AP (0.48) and LQ (0.10; Table 1). Inbreeding (FIS) was significantly different between populations in the test including all populations (analysis of variance F(3)=21.23, P<0.001), and differed between several populations pairs (t-tests: CK-KP: Padj=0.841; CK-AP: Padj=0.186; CK-LQ: Padj<0.001; KP-AP: Padj=0.023; KP-LQ: Padj<0.001; AP-LQ: Padj<0.001).
The observed level of heterozygosity (HSP) in the sporophytes ranged between 0 and 0.46 (Figure 1). A total of 19 sporophytes from 8 different female shoots were homozygous in all loci. On 18 out of 21 female shoots, two or more sporophytes had identical genotypes (missing data ignored) and consequently identical fathers, suggesting the possibility that single males had frequently fertilized female shoots multiple times. Alternatively, the resolution of the SNPs used was too low to distinguish between fathers that were genetically very similar. The mean expected sporophyte heterozygosity over all loci (mean HEXP) was 0.32 in AP, 0.24 in KP, 0.19 in LQ and 0.23 in CK (Figure 1). A majority of the sampled sporophytes had a lower level of heterozygosity than expected (Figure 1). However, several sporophytes in each population had a higher level of heterozygosity than expected; 5 sporophytes in AP (from 3 shoots), 3 sporophytes in KP (from 2 shoots), 11 sporophytes in LQ (from 2 shoots) and 6 sporophytes in CK (from 2 shoots), equivalent to 23% of all sampled sporophytes (Figure 1).
Post-fertilization selection test
For 9 of the 21 female shoots, one or more father haplotypes (mean 51±31%) were represented among the dwarf males sampled from the same female. In total, 22% of all distinct father haplotypes in the study were represented in the sampled dwarf males. The father haplotypes that were not represented in the sampled dwarf males may originate from unsampled dwarf males present on the female shoot, other dwarf males within fertilization distance (on neighbouring shoots) or dwarf males that have died and disappeared since the fertilization period. There was no difference in observed heterozygosity level between the sampled sporophytes (HSP) and the theoretical sporophytes sired by the dwarf males on a female host shoot (HTH) (F(1, 295)=0.93, P=0.34; Figure 2).
Discussion
Dwarf males occur in a large variety of different organisms and have likely evolved for several different reasons. It is possible to imagine that in some environments, epiphytic dwarf males have evolved purely as an ecological adaptation, for example, to reduce competition between the sexes. In such cases, inbreeding may turn out to be a negative side effect. Our results show that this is not necessarily true. In the moss H. lutescens, we found that polyandry was frequent; on average, female shoots carried sporophytes sired by at least three different males. The level of heterozygosity in the sporophytes varied between shoots and was occasionally high, despite significant levels of inbreeding within three of the populations.
Frequent polyandry
The female shoots support a relatively large number of distinct dwarf males, and on average a minimum of 7.9 distinct haplotypes were found on a single female host. Polyandry appears to be the rule rather than the exception in the sampled populations of H. lutescens, and an average of 59% of the sporophytes on each female shoot had been sired by distinct fathers. All but three females had been fertilized by more than one male (Figure 1). The average level of paternity skew was moderate (0.87) and the mean number of effective fathers on a single female (2.7) was close to the actual number of distinct fathers (3.1). The spatial separation of the (often numerous) branches from which the perichaetia are produced (F Rosengren, personal observation) likely reduces the chance of a single male fertilizing all archegonia. Frequent polyandry has previously been reported for S. lescurii, where on average 64% of the sporophytes on each female shoot had been sired by distinct fathers (Szövényi et al., 2009). Mating with multiple males is a prerequisite for the possibility of post-fertilization selection and could thus be essential in populations where such mechanisms have developed (for example, to prevent inbreeding). It is important to notice that frequent polyandry means that the effective size of populations is increased because more males are involved in mating. Thus, the risk for genetic drift is decreased (cf. Bengtsson and Cronberg, 2009).
On the other hand, a large majority of the female shoots had one or more sporophytes with identical genotypes, suggesting either that single dwarf males have fertilized a female multiple times, or that some females have been fertilized by several identical male individuals. The likelihood for different dwarf males to fertilize a female probably varies markedly and is related to both timing and placement. Female shoots are only fertile during late spring/early summer (Arnell, 1875; Grimme, 1903). Hence, the dwarf males that are fertile at the same time as the females have a great fertilization advantage. In addition, the placement of the dwarf male in relation to the perichaetia should be of large importance and could perhaps partly explain the observed paternity skew.
Inbreeding
Heterozygote deficiency (FIS) has previously been estimated to be ∼0.41±0.11 for dioicous bryophytes (based on five different species, Eppley et al., 2007). We detected higher values in three of the studied populations (0.64, 0.59 and 0.48, respectively), and lower in one population (0.10) (Table 1). Significant deviation from Hardy–Weinberg equilibrium (FIS>0) in three of the four populations can possibly be attributed to significant population spatial structure (F Rosengren et al., unpublished data).
A majority of the sporophytes had an overall lower level of heterozygosity than expected from the allele frequencies at the population level. In three of the populations, sporophytes with 100% homozygosity were found, and this could possibly be explained by repeated inbreeding. If dwarf males are frequently produced by sporophytes on their host shoot, mating between mother and son may be common. Because of the shoots being haploid, each mating between mother and son reduces on average the heterozygosity level by 50%. If we start off with a heterozygosity level of for example 0.24 (the average in population KP), it would theoretically require no more than five cycles of mother–son mating events to reach 1% heterozygosity (equivalent to total homozygosity in 68 markers). However, the level of heterozygosity in the sporophytes varied markedly between (and within) female shoots and none of the populations had consistently high levels of homozygosity (Figure 1). Several sporophytes (distributed between all populations) had a higher heterozygosity level than expected, suggesting outcrossing. Hence, although inbreeding does occur, there are several exceptions where a female shoot appears to have been fertilized by a dwarf male produced by a sporophyte on another female. The dwarf male in question may have been hosted either by the female that was fertilized or another nearby shoot.
No evidence of post-fertilization selection
Because of the fact that bryophytes have limited possibility to assess mate quality before fertilization (Szövényi et al., 2009), post-fertilization selection could potentially be an efficient way of increasing the fitness of the sporophytes. However, we found no evidence of post-fertilization selection favouring more heterozygous sporophytes in the sexual reproduction.
Observations in the field (F Rosengren) suggest that some dwarf males of H. lutescens are able to over winter and fertilize the female the year after they were produced. Consequently, the sporophytes sampled in this study may have been sired by a mix of dwarf males produced the same year (that is, the sampled dwarf males) and the year before. Varying levels of sexual reproduction and spore dispersal between years could mean that dwarf males from two cohorts differ regarding the general level of relatedness to the female host. Hence, the observed level of heterozygosity in the sporophytes may be higher than expected from the sampled dwarf males for other reasons than post-fertilization selection. However, our results suggest that the dwarf males that sire sporophytes are more or less a random subset of the available mating partners, although there appears to be some paternity skew in that some dwarf males sire more sporophytes than others (possibly as a result of fortunate timing or placement).
One consequence of the dominant haploid life stage in bryophytes is that deleterious recessive alleles are expected to be purged rather efficiently from the population (Eppley et al., 2007; Taylor et al., 2007; Szövényi et al., 2014). As a consequence, inbreeding depression may be low even in populations that experience frequent inbreeding. The life stage that is most likely to suffer from inbreeding depression is the diploid sporophytic phase (Taylor et al., 2007). The studies that have attempted to address the relationship between heterozygosity and fitness in sporophytes of various bryophyte species have rendered conflicting results, suggesting that inbreeding depression may be present under certain circumstances but not others (Taylor et al., 2007; Szövényi et al., 2009; Perroud et al., 2011; Jesson et al., 2012; McDaniel and Perroud, 2012; Johnson and Shaw 2015). If the level and risk of inbreeding depression varies greatly between different populations, the selection pressure to avoid inbreeding is also expected to differ. Hence, in the studied populations, selection favouring post-fertilization selection may have been weak. To get a deeper understanding of the potential consequences of inbreeding in bryophytes, the relative importance of inbreeding depression needs to be further investigated in populations with different mating systems.
Conclusions
Bryophytes (mosses, liverworts and hornworts) and spore-producing tracheophytes (lycophytes and pteridophytes) have motile sperm that need a water surface for transportation; a mechanism retained from their algal ancestors. This type of fertilization is considered to be an evolutionary constraint in terrestrial environments because of dependence of water and restricted fertilization distances. Nannandry can be seen as an adaptation to overcome this constraint. However, concerns have been raised that nannandry would lead to serious inbreeding and loss of genetic variation. Here we provide unique data on polyandry and inbreeding levels in a nannandrous species. Our results show that females were frequently fertilized by several different males. Furthermore, sporadic fertilization of dwarf males originating from nonhost females appears to counteract serious inbreeding. Genetic studies in species with dwarf males are desperately few, and this means it is difficult to draw conclusions about whether our findings would also apply for other organisms. To fully understand the evolution of the dwarf male sexual system, results from the various kinds of organisms with this reproductive system need to be evaluated and compared.
Data archiving
The SNP genotypes of all the samples as well as the sequences for the 68 used SNP markers are available from the Dryad Digital Repository at http://dx.doi.org/10.5061/dryad.1860s. All isotigs used for the SNP extraction are stored in an annotated database available at http://mbio-serv2.mbioekol.lu.se/Mosses.
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Acknowledgements
This study was supported by grants from The Royal Physiographic Society in Lund, Elly Olssons fund and Ove Almborns fund (to FR). We thank the 454 sequencing platform in Lund University (Science Faculty) for valuable support during the whole process of sequencing and extracting SNP markers. Genotyping was performed by the SNP&SEQ Technology Platform in Uppsala that is part of Science for Life Laboratory at Uppsala University and is supported as a national infrastructure by the Swedish Research Council (VR-RFI).
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Rosengren, F., Cronberg, N. & Hansson, B. Balance between inbreeding and outcrossing in a nannandrous species, the moss Homalothecium lutescens. Heredity 116, 107–113 (2016). https://doi.org/10.1038/hdy.2015.79
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DOI: https://doi.org/10.1038/hdy.2015.79
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