Original Article
Genes and Immunity (2007) 8, 69–74. doi:10.1038/sj.gene.6364360; published online 30 November 2006
No evidence of association between genetic variants of the PDCD1 ligands and SLE
A K Abelson1, C M Johansson1, S V Kozyrev1, H Kristjansdottir1,2, I Gunnarsson3, E Svenungsson3, A Jönsen4, G Lima5, H R Scherbarth6, S Gamron7, A Allievi8, S A Palatnik9, A Alvarellos10, S Paira11, C Graf12, C Guillerón13, L J Catoggio14, C Prigione15, C G Battagliotti16, G A Berbotto17, M A García18, C E Perandones19, L Truedsson20, K Steinsson2, G Sturfelt4, B Pons-Estel21,22, The Argentinean Collaborative Groupe andM E Alarcón-Riquelme1
- 1Department of Genetics and Pathology, Rudbeck Laboratory, Uppsala University, Uppsala, Sweden
- 2Center for Rheumatology Research, Landspitali, Reykjavik, Iceland
- 3Department of Medicine, Rheumatology Unit, Karolinska Institutet/Karolinska University Hospital, Solna, Sweden
- 4Department of Rheumatology, Lund University Hospital, Lund, Sweden
- 5Department of Immunology and Rheumatology, Instituto Nacional de Ciencias Médicas y Nutrición 'Salvador Zubirán', Mexico City, Mexico
- 6Servicio de Reumatología, Hospital Interzonal General de Agudos 'Dr Oscar Alende', Mar del Plata, Argentina
- 7Servicio de Reumatología de la UHMI 1, Hospital Nacional de Clínicas, Universidad Nacional de Córdoba, Córdoba, Argentina
- 8Hospital General de Agudos Dr Juán A Fernandez, Buenos Aires, Argentina
- 9Facultad de Ciencias Medicas, Universidad Nacional de Rosario y Hospital Provincial del Centenario, Rosario, Argentina
- 10Servicio de Reumatología, Hospital Privado, Centro Medico de Córdoba, Córdoba, Argentina
- 11Sección de Reumatología, Hospital José M Cullen, Santa Fe, Argentina
- 12Hospital San Martín, Paraná, Entre Ríos, Argentina
- 13Departamento de Inmunología, Instituto de Investigaciones Médicas 'Alfredo Lanari', Buenos Aires, Argentina
- 14Sección Reumatología, Servicio de Clínica Médica, Hospital Italiano de Buenos Aires y Fundación Dr Pedro M Catoggio para el Progreso de la Reumatología, Buenos Aires, Argentina
- 15Servicio de Reumatología, Hospital Provincial de Rosario, Rosario, Argentina
- 16Hospital de Niños Dr Orlando Alassia, Santa Fe, Argentina
- 17Servicio de Reumatología Hospital Escuela Eva Perón, Granadero Baigorria, Rosario, Argentina
- 18Servicio de Reumatología, Hospital Interzonal General de Agudos General San Martín, La Plata, Argentina
- 19Centro de Educación Médica e Investigaciones Clínicas (CEMIC), Buenos Aires, Argentina
- 20Institute of Laboratory Medicine, Lund University, Lund, Sweden
- 21Sanatorio Parque, Rosario, Argentina
Correspondence: Dr ME Alarcón-Riquelme, Department of Genetics and Pathology, Rudbeck Laboratory, Dag Hammarskjölds väg 20, 751 85 Uppsala, Sweden. E-mail: marta.alarcon@genpat.uu.se
22Dr Pons-Estel is the coordinator of the Argentinean Collaborative group. All members are found in the appendix at the end.
Received 15 September 2006; Revised 26 October 2006; Accepted 27 October 2006; Published online 30 November 2006.
Abstract
PDCD1, an immunoreceptor involved in peripheral tolerance has previously been shown to be genetically associated with systemic lupus erythematosus (SLE). PDCD1 has two ligands whose genes are located in close proximity on chromosome 9p24. Our attention was drawn to these ligands after finding suggestive linkage to a marker (gata62f03, Z=2.27) located close to their genes in a genome scan of Icelandic families multiplex for SLE. Here, we analyse Swedish trios (N=149) for 23 single nucleotide polymorphisms (SNPs) within the genes of the PDCD1 ligands. Initially, indication of association to eight SNPs was observed, and these SNPs were therefore also analysed in Mexican trios (N=90), as well as independent sets of patients and controls from Sweden (152 patients, 448 controls) and Argentina (288 patients, 288 controls). We do not find support for genetic association to SLE. This is the first genetic study of SLE and the PDCD1 ligands and the lack of association in several cohorts implies that these genes are not major risk factors for SLE.
Keywords:
systemic lupus erythematosus, genetic association, linkage disequilibrium, autoimmunity, PD-L1, PD-L2
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