Full Paper

Genes and Immunity (2005) 6, 95–102. doi:10.1038/sj.gene.6364163 Published online 27 January 2005

Genome screen in the French EGEA study: detection of linked regions shared or not shared by allergic rhinitis and asthma

M -H Dizier1, E Bouzigon2, M Guilloud-Bataille1, C Bétard3, J Bousquet4, D Charpin5, F Gormand6, J Hochez7, J Just8, A Lemainque3, N Le Moual9, R Matran10, F Neukirch11, M -P Oryszczyn9, E Paty12, I Pin13, D Vervloet14, F Kauffmann9, M Lathrop3, F Demenais2 and I Annesi-Maesano9

  1. 1INSERM U535, Hôpital Paul Brousse, Bâtiment Leriche, Villejuif Cedex, France
  2. 2INSERM EMI 00-06, Evry, France
  3. 3Centre National de Génotypage, Evry, France
  4. 4Clinique des maladies respiratoires, INSERM U454, Hôpital Arnaud de Villeneuve, Montpellier, France
  5. 5Service de pneumologie-allergologie, Hôpital Nord, Marseille, France
  6. 6Service de Pneumologie, centre hospitalier Lyon-Sud, Pierre Benite
  7. 7INSERM U436, Paris, France
  8. 8Centre de diagnostic et traitement de l'asthme, Hôpital Trousseau, Paris, France
  9. 9INSERM U472, Villejuif, France
  10. 10Laboratoire d'exploration fonctionnelle, Hôpital Calmette, Lille, France
  11. 11INSERM U408, Paris, France
  12. 12Service de pneumologie infantile, Hôpital Necker, Paris, France
  13. 13Département de Médecine Aigüe Spécialisée, CHU Michallon, Grenoble, France
  14. 14Service de pneumo-allergologie, Hôpital Ste Marguerite, UPRES EA 3287, Marseille, France

Correspondence: Dr M-H Dizier, INSERM U535, Hôpital Paul Brousse, Bâtiment Leriche, BP 1000, 94817 Villejuif Cedex, France. E-mail: dizier@vjf.inserm.fr

Received 9 July 2004; Revised 1 December 2004; Accepted 1 December 2004; Published online 27 January 2005.

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Abstract

In the sample of 295 French EGEA families with at least one asthmatic subject, a genome screen was conducted to identify potential linkage regions specific either to allergic rhinitis (AR) or to asthma as well as those shared by the two diseases. Two binary rhinitis phenotypes based on (1) diagnosis (ARbin1) and (2) symptoms (ARbin2) and a categorical ordered trait (ARcat) were considered. Asthma phenotype was based on answers to a standardized questionnaire plus the presence of bronchial hyper-responsiveness. Linkage analyses were conducted using the maximum likelihood binomial (MLB) method. These analyses provided potential evidence for linkage to three regions in the whole sample: 1p31 for the phenotype defined by ARbin2 plus asthma (P=0.00016), 2q32 for ARbin2 (P=0.00016) and 3p24–p14 for ARcat (P=0.001). Two other regions were detected in the subset of 185 families with at most one asthmatic sib: 9p22 and 9q22–q34 for ARbin1 (P=0.001 and 0.0007, respectively). No region showed evidence for linkage to asthma without being also linked to AR. While 1p31 may contain a genetic determinant common to asthma and AR, 2q32, 3p24–p14, 9p22 and 9q22–q34 are more likely to harbor genetic factors specific to AR.

Keywords:

allergic rhinitis, asthma, linkage analysis, genome screen

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