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Article
Subject Categories: Chromatin & Transcription | Plant Biology
The EMBO Journal (2007) 26, 1691–1701, doi:10.1038/sj.emboj.7601603
Published online 1 March 2007
Role of Arabidopsis AGO6 in siRNA accumulation, DNA methylation and transcriptional gene silencing
Xianwu Zheng, Jianhua Zhu, Avnish Kapoor and Jian-Kang Zhu
Department of Botany and Plant Sciences, University of California, CA, USA

To whom correspondence should be addressed
Jian-Kang Zhu, Department of Botany and Plant Sciences, University of California, 2150 Batchelor Hall, University of California, Riverside, CA 92521, USA. Tel.: +1 951 827 7117; Fax: +1 951 827 4437; E-mail: jian-kang.zhu@ucr.edu

Received 17 July 2006; Accepted 24 January 2007; Published online 1 March 2007.
Abstract
Argonautes (AGOs) are conserved proteins that contain an RNA-binding PAZ domain and an RNase H-like PIWI domain. In Arabidopsis, except for AGO1, AGO4 and AGO7, the roles of seven other AGOs in gene silencing are not known. We found that a mutation in AGO6 partially suppresses transcriptional gene silencing in the DNA demethylase mutant ros1-1. In ago6-1ros1-1 plants, RD29A promoter short interfering RNAs (siRNAs) are less abundant, and cytosine methylation at both transgenic and endogenous RD29A promoters is reduced, compared to that in ros1-1. Interestingly, the ago4-1 mutation has a stronger suppression of the transcriptional silencing phenotype of ros1-1 mutant. Analysis of cytosine methylation at the endogenous MEA-ISR, AtREP2 and SIMPLEHAT2 loci revealed that the CpNpG and asymmetric methylation levels are lower in either of the ago6-1 and ago4-1 single mutants than those in the wild type, and the levels are the lowest in the ago6-1ago4-1 double mutant. These results suggest that AGO6 is important for the accumulation of specific heterochromatin-related siRNAs, and for DNA methylation and transcriptional gene silencing, this function is partly redundant with AGO4.
Keywords: Argonaute, RNA-directed DNA methylation, silencing, small RNA
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