|
Discussion Our first conclusion is that Sho is a bona fide neuronal glycoprotein and the third member of the mammalian prion protein family. Beyond mere sequence homology, Sho demonstrates a number of biochemical and cell biological properties also exhibited by PrPC. These include addition of a GPI anchor, N-glycosylation at one or two sites and a cleavage event likely positioned N-terminal to the hydrophobic tract (Figures 1 and 2C–E; Supplementary Figure S1). Furthermore, there are functional redundancies between PrPC and Sho measured in CGN cells. Although Sho and PrPC have dissimilar N-terminal regions that may tailor their activities in different neuroanatomic sites, we infer that the center of both PrPC and Sho comprises a functionally conserved and ancient activity domain contributing to neuroprotection. In PrPC-deficient areas of the brain, Sho may be particularly important in filling-in a PrP-like activity. Although the exact relevance of PrPC/Sho neuroprotection against exogenous stimuli versus in vivo brain physiology remains to be deciphered, a role against neuronal insults such as ischemic damage seems plausible. Indeed, increased PrPC expression following stroke has been observed in both humans and mice (McLennan et al, 2004; Weise et al, 2004).
A second conclusion is that the study of Sho may help decipher the molecular mechanisms underlying physiological signaling from the prion protein family. Here, some initial hints can be inferred from mutational analysis. As deletions invade the central region of PrPC, not only is protective activity lost, but the mutant PrPs gain spontaneous proapoptotic activity, as shown by loss of the granule cell layer in Tg mice (Flechsig et al, 2004), and echoed here by the divergent performance of PrP 106–112 and 106–121 alleles in the CGN assay. It is possible that a gain of proapoptotic function for PrP within CA1 neurons when it is sterically blocked and dimerized by antibodies against residues 95–105 proceeds by a related mechanism (Solforosi et al, 2004). In any event, the PrPC central region defined by genetic mapping (analyzed by CGN assays in this paper, see also Lee et al, 2006) is natively unstructured in NMR studies (Donne et al, 1997; Riek et al, 1997) and the homologous region in Sho is likely to be natively unstructured as well (Figure 2B). This region may serve as a site for protein–protein interactions, and in this regard, our results parallel and extend a model for signaling from PrPC protein complexes. Besides PrPC, this model involves a hypothetical ligand, LPrP, and a conjectural PrPC-like protein denoted ' ' (Shmerling et al, 1998; Flechsig et al, 2004). Two docking sites are posited between LPrP and PrPC, and one docking site between Dpl or PrP and LPrP. Based on sequence similarity and domain structure (Figure 1), biochemical properties (Figure 2), a low level expression of Sho in the cerebellar granule cells (Figures 4L and 6D), and similar effects of wt PrP or Sho versus Dpl or PrP 32–121 in CGN assays (Drisaldi et al, 2004) (Figure 6B), Sho can be seen to resemble . In this scheme, sequences within or around the hydrophobic domain of Sho or PrPC would comprise a docking site for LPrP, a site associated with a protective effect. In PrPC, partial loss of this site may confer spontaneous neurotoxic behavior, consistent with the enhanced toxicity observed in Tg mice expressing PrP with HD deletions (Baumann et al, 2007; Li et al, 2007). A second site lying within the -helical domain present in PrP, PrP and Dpl is associated with a toxic effect (i.e., as per PrP and Dpl) unless the first site is also present (as in wt PrPC) (Shmerling et al, 1998; Cui et al, 2003; Drisaldi et al, 2004). Even though the original LPrP–PrPC– model may prove incorrect in a cell biological sense (i.e., that signaling may have more to do with protection from toxic stimuli rather than regulation of endogenous trophic signals), it provides a useful framework for deciphering molecular interactions. Certainly the ability to now perform studies with PrP, PrP, Dpl and Sho and assess responses within a cellular assay should aid the identification of authentic PrP interactors.
A third conclusion is that Sho may open a window to pathological signaling events in prion disease. Studies of scrapie-infected rodents support the concept of neuroanatomic 'target areas' that give rise to the clinical features of disease (Kimberlin and Walker, 1986). Thus far, the mechanisms by which disease associated forms of PrP (PrPSc or 'PrPD') might cause dysfunction in these target areas have proven elusive (Flechsig et al, 2000). For example, whereas a requirement for PrPC was inferred from grafting tissue from mice overexpressing PrPC into Prnp0/0 mouse brains and performing prion challenge of chimeric mice (Brandner et al, 1996), a genetic reconstitution experiment employing an astrocyte-specific hamster PrP transgene demonstrated an opposite effect, namely neuronal damage in PrPC-deficient neurons upon prion challenge (Jeffrey et al, 2004). The concept of pathogenesis in trans, that is, independent of PrPC expression, is underlined by prior studies and by experiments herein, which demonstrate that the dendrites of CA1 neurons, an early 'clinical target area' in prion infections, are largely devoid of PrPC (Figure 5D and E). Susceptibility of dendritic structures in this neuroanatomic area has been demonstrated by several techniques in different models of infectious prion disease (Hogan et al, 1987; Johnston et al, 1997; Brown et al, 2001). We note that these structures are strongly labeled by both Sho peptide directed antisera in wt mice (Figure 5A and B), and are distorted and attenuated in prion-infected mice (not shown), as already described by others (Hogan et al, 1987; Johnston et al, 1997; Brown et al, 2001).
Strikingly, Western blot analyses of brains from clinically ill prion-infected mice revealed a dramatic reduction of Sho protein (Figure 7). Because Sho has neuroprotective properties (Figure 6), it seems reasonable to consider whether a loss of Sho may underlie some of the clinical or pathological features of prion disease. In this regard, future studies utilizing Sprn0/0 mice should prove informative. The mechanism governing the loss of Sho protein during prion infections remains to be determined. While a transcriptional effect seems unlikely (not shown), protein structure may play a role. Since Sho's conserved region coincides with the epicenter of PrPC misfolding to disease-associated forms such as PrPSc (Peretz et al, 1997, 2001; Beringue et al, 2004), conformational alterations in unstructured, cell-anchored Sho (or in Sho shed into the parenchyma, like other GPI-anchored proteins; Parkin et al, 2004) may occur upon interaction with PrPSc. However, this does not explain how altered Sho proteins, should they exist, might be more prone to degradation. Expanding the view to include the concept of aberrant signaling may provide a more useful take on this problem. Assuming that Sho exerts a neuroprotective function, perturbations in this protective pathway could destabilize Sho or lead to a loss of Sho-expressing cells and a commensurate drop in protein level. According to this hypothesis, parenchymal PrPSc might interfere with the physiological protective activity of Sho in trans by virtue of both its aberrant fold and cell biological resemblance to Sho. While new experiments will be required to probe the validity of these concepts and the mechanisms controlling Sho expression, we suggest that Sho is a potential modulator for the biological actions of normal and abnormal PrP.
Materials and methods Bioinformatics and statistics
Protein alignments were created using the T-COFFEE algorithm and EST searches conducted using UniGene. Data sets for all transfected constructs were assessed for normality (P>0.10) by the Kolmogorov–Smirnov test and analyzed by one-way ANOVA, Tukey pairwise comparisons, with significance set at P<0.05, using Prism software (v4.0c, GraphPad Inc.).
Mouse lines, husbandry and inoculations
Zrch I Prnp0/0 mice and littermates were maintained on a C57/B6 congenic background. Mice for inoculations, either C3H/B6 hybrids (Toronto) or B6 inbred (McLaughlin Research Institute) were inoculated intracerebrally with 30 l of 0.1% RML-infected brain homogenate diluted in phosphate-buffered saline (PBS) containing BSA (50 mg/ml), penicillin (0.5 U/ml) and streptomycin (0.5 g/ml). Age-matched non-inoculated or mice inoculated with normal brain comprised negative controls. Clinically ill mice were killed and 10% brain homogenates in PBS were prepared. Proteinase K digestions (50 g/ml) were performed at 37°C for 1 h. Sho levels were calculated by densitometry (Scion Image) and comparison to a standard curve created from serial dilutions of non-infected brain homogenate. TgCRND8 mice (Chishti et al, 2001) on a C3H/C57BL6 outbred background were killed at clinical illness ( 8 months) and 10% brain homogenates prepared in 0.32 M sucrose containing protease inhibitors.
Plasmid generation and recombinant protein
The Sho open reading frame was amplified from mouse genomic DNA and inserted between the HindIII and XbaI sites of either pcDNA3 or pBUD.CE4. GFP (Invitrogen). PrP and Sho mutants were generated using methods previously described (Drisaldi et al, 2004), with constructs verified by DNA sequencing (details available on request). cDNA encoding residues 25–122 of the mouse protein was amplified from pcDNA3.Sho and inserted between the NdeI and BamHI sites of the pET-19b vector (Novagen) and expressed in E. coli BL21(DE3)/RIL (Stratagene). Following induction and lysis, filtered lysate was subjected to Ni2+ affinity chromatography (Qiagen), eluted with 250 mM imidazole and dialyzed into 20 mM Tns–Hcl pH8.0, 100 mM NaCl. The polyhistidine tag was removed with enterokinase (Roche). Purity was assessed by SDS–PAGE and concentration estimated using bovine serum albumin standards. Far-UV circular dichroism spectra of recombinant Sho in PBS pH 7.0 and a protein concentration of 0.1 mg/ml were collected at 22°C using a Jasco J-715 spectropolarimeter.
Sho antibody production
The peptide CRRTSGPGELGLEDDE (Sho residues 86–100 plus an N-terminal cysteine) was conjugated to maleimide-activated KLH (Pierce) and injected into New Zealand White rabbits. Alternatively, recombinant Sho was conjugated to KLH using EDC (1-ethyl-3-[3-dimethylaminopropyl] carbodiimide hydrochloride) chemistry (Pierce) and injected into rabbits. Antibodies were precipitated from serum using ammonium sulfate and then affinity purified using the respective peptide (SulfoLink column) or polypeptide (AminoLink Plus Coupling Gel column) immunogens. Epitope positions are shown in Figure 2.
Cell culture and PI-PLC treatment
N2a cells, HEK293 and CGN cells were cultured, transfected and lysed as described previously (Drisaldi et al, 2004), except that staining for an activated caspase 3 neo-epitope (Cell Signaling Technology) was used to quantify apoptotic events and conditioned medium from adjacent wells replaced medium on transfected cells. CGN assays represent two or more independent triplicate transfections into Prnp0/0 cells, with observers being blind to the genotype of transfected test plasmids. For PIPLC treatment, 24 h post-transfection, Sho-transfected N2a cells were washed three times with PBS, and then treated with PI-PLC (Invitrogen) diluted in PBS for 40 min at 4°C. Cells were then washed twice and lysed as above.
Immunocytochemistry and immunohistochemistry
N2a or HEK293 cells 24 h post-transfection were washed with PBS, fixed with 4% paraformaldehyde, washed with PBS, blocked with 2% goat serum, then incubated with either Sho antibody (04SH-1, 6 g/ml) or PrP antibody (8H4, 1 g/ml), overnight at 4°C. Following PBS washes, cells were incubated with AlexaFluor488- or AlexaFluor594-conjugated secondary antibodies (Invitrogen; 1:300) for 2 h and then washed three times with PBS. For tissue analysis, mice were saline-perfused. Brains were fixed in Carnoy's fixative (10% glacial acetic acid, 60% methanol, 30% chloroform) bisected and processed. Six-micrometer sections were dried, deparaffinized and taken to TBS (pH 7.2) for incubation with primary antibody at 4°C (anti-Sho 04SH-1 (1:100, this paper), anti-Sho 06SH-3 (1:200, this paper), anti-Sho 06rSH-1 (1:50, this paper), anti-PrP 3F4 (1:20 000; Signet), anti-PrP 7A12 (1:10 000; Li et al, 2000), and anti-calbindin D-28K (1:2000; Chemicon). Other antibodies used include anti-Thy-1, R194 (a generous gift from Roger Morris); anti-NSE, rabbit polyclonal from Polysciences Inc.; anti-synaptophysin, SY38 from Chemicon; anti-actin, rabbit polyclonal from Sigma (20–33); and anti-neurofilament H, SMI-32 from Sternberger Monoclonals Inc. For peptide blocking of antibody reactivity, peptide was added in four-fold mass excess to Sho antibody and incubated overnight at 4°C before use. Sections were rinsed in TBS and processed in DakoCytomation EnVision Labelled Polymer, visualized with DAB (3,3'-diaminobenzidine) and counterstained with Harris' hematoxylin. Images were obtained with a Leica DM6000B microscope using a Micropublisher 3.3RTV camera (Q Imaging Inc.) and OpenLab4.0.4 software (Improvision). Images in Figures 5L, M and 6E were de-convoluted using the iterative restoration function in Volocity. For fluorescent double labeling experiments, the secondary antibodies used were AlexaFluor-488 (green) and AlexaFluor-594 (red)-conjugated antibodies (Invitrogen). For immunocytochemistry on CGNs (Figure 6E), cells were fixed 24 h post-transfection in ice-cold methanol for 5 min at -20°C, and then processed and stained.
In situ hybridization
pcDNA3.Sho plasmid was linearized with HindIII or BglII to generate antisense and sense probes, respectively, using the DIG RNA labeling kit (Roche). Sections (6 m) of formalin-fixed brains were cut using an RNase-free blade, mounted and dried overnight at 63°C. Tissue processing and in situ hybridization was performed as described by Peterson et al (2004). DIG-labeled RNA probes were diluted 1/200–1/400 in hybridization buffer. Alkaline phosphate substrate NBT/BCIP was added, color development performed for 16 h in the dark and slides mounted without counterstaining.
Brain preparation and Western blotting
Mouse whole-brain homogenates were prepared in 0.32 M sucrose containing complete protease inhibitor cocktail (Invitrogen). For preparation of crude membranes, homogenates were spun at 700 g for 10 min at 4°C, pellets washed with 1 volume of homogenization buffer, spun again as above, supernatants were pooled then spun at 100 000 g for 1 h at 4°C and pellets resuspended in cold 50 mM Tris–HCl, pH 7.4, 150 mM NaCl, 1 mM EDTA, 1% Triton X-100. After spinning (100 000 g, 1 h, 4°C) the supernatant was stored at -80°C. Protein was separated on either NuPAGE 4–12% gels (Invitrogen) using the MES buffer system, or by conventional SDS–PAGE using 14% polyacrylamide gels and transferred to either nitrocellulose (PrP blots, 3% BSA block) or PVDF (Sho blots, 5% non-fat skim milk block). Blots were incubated overnight with primary antibodies (D13 or D18 at 0.5 g/ml for PrP (InPro Inc.), or 04SH-1 or 06rSH-1 Sho polyclonals at 1:500 or 1:2000, respectively, incubated with HRP-conjugated secondary antibody and developed using 'Western Lightning' ECL (Perkin-Elmer). The embryo blot was supplied from Zyagen (San Diego, CA), probed with 04SH-1 and then stripped using 0.2 M glycine pH 2.2, 1% Tween-20, 0.1% SDS, followed by reprobing with D13 antibody
Supplementary data
Supplementary data are available at The EMBO Journal Online (http://www.embojournal.org).
Acknowledgements
This work was supported by the Canadian Institutes of Health Research (Grants MOP36377 and MSC46763) and a fellowship to JCW from the Natural Sciences and Engineering Research Council of Canada (PGSD2-319161-2005). We also acknowledge the travel grants from the CIHR-Strategic Training in Health Research (STIHR) initiative and the Canadian Network Centres of Excellence ('PrioNet'). DW is an Alberta Prion Research Institute Scholar. We thank Nathalie Daude and Agnes Lau for bioinformatic analyses, and Janice Robertson, Julie Forman-Kay and Rod Bremner for discussions.
References
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