Article

  • The EMBO Journal (2004) 23, 616 - 626
  • doi:10.1038/sj.emboj.7600070

Published online: 29 January 2004

  • Subject Category:

Human Fip1 is a subunit of CPSF that binds to U-rich RNA elements and stimulates poly(A) polymerase

Isabelle Kaufmann1, Georges Martin1, Arno Friedlein2, Hanno Langen2 and Walter Keller1

  1. Department of Cell Biology, Biozentrum, University of Basel, Basel, Switzerland
  2. Roche Genetics, F Hoffmann-La Roche Ltd, Basel, Switzerland

Correspondence to:

Walter Keller, Department of Cell Biology, Biozentrum, University of Basel, Klingelbergstrasse 70, CH-4056 Basel, Switzerland. Tel.: +41 61 267 20 60; Fax: +41 61 267 20 79; E-mail: walter.keller@unibas.ch

Received 18 August 2003; Accepted 17 December 2003


In mammals, polyadenylation of mRNA precursors (pre-mRNAs) by poly(A) polymerase (PAP) depends on cleavage and polyadenylation specificity factor (CPSF). CPSF is a multisubunit complex that binds to the canonical AAUAAA hexamer and to U-rich upstream sequence elements on the pre-mRNA, thereby stimulating the otherwise weakly active and nonspecific polymerase to elongate efficiently RNAs containing a poly(A) signal. Based on sequence similarity to the Saccharomyces cerevisiae polyadenylation factor Fip1p, we have identified human Fip1 (hFip1) and found that the protein is an integral subunit of CPSF. hFip1 interacts with PAP and has an arginine-rich RNA-binding motif that preferentially binds to U-rich sequence elements on the pre-mRNA. Recombinant hFip1 is sufficient to stimulate the in vitro polyadenylation activity of PAP in a U-rich element-dependent manner. hFip1, CPSF160 and PAP form a ternary complex in vitro, suggesting that hFip1 and CPSF160 act together in poly(A) site recognition and in cooperative recruitment of PAP to the RNA. These results show that hFip1 significantly contributes to CPSF-mediated stimulation of PAP activity.

  • Keywords:

    • cleavage and polyadenylation specificity factor,
    • polyadenylation,
    • poly(A) site recognition,
    • pre-mRNA 3' end processing,
    • upstream sequence elements
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