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Introduction Diverse biological processes such as cell adhesion, signalling and virus infection depend on the modification of cell surface macromolecules with a group of nine-carbon monosaccharides known as sialic acids (Varki, 1999). Owing to their negative charge and terminal position in oligosaccharide chains, these sugars are accessible to specific lectins from apposing membranes. In vertebrates, many sialic acid-dependent interactions involve the families of selectins and sialic acid-binding immunoglobulin-like lectins (siglec), which, respectively, mediate adhesion between circulating lymphocytes and blood vessels (Patel et al, 2002) or regulate intercellular signalling in the haemopoietic, immune and nervous system (Crocker, 2002). Sialic acids can also provide a physical barrier to other recognition mechanisms. For instance, polysialylation of the neural cell adhesion molecule (NCAM) prevents its homophilic binding and promotes plasticity during central nervous system (CNS) development (Kiss and Rougon, 1997).
The biological importance of sialylation is demonstrated by the existence of several disorders with altered sialic acid metabolism. For instance, sialyltransferases, which transfer sialic acid to nascent oligosaccharides in the Golgi, often show altered expression in cancer (Varki, 1999). Mutations in the rate-limiting enzyme of sialic acid synthesis, UDP-N-acetylglucosamine-2-epimerase/N-acetylmannosamine kinase (GNE), cause two types of inherited disease: those that impair enzymatic activity cause recessive distal myopathies (Nonaka, 1999), whereas other missense mutations which suppress a negative allosteric mechanism of GNE cause sialic acid accumulation in the cytosol and a dominant form of sialuria (OMIM 269921) (Aula and Gahl, 2001). Degradation of sialoglycoconjugates is important as well. Diverse lysosomal storage diseases, such as sialidosis, Tay-Sachs disease or Sandhoff disease, are blocked at a specific enzymatic step of sialoglycoconjugate catabolism (Platt and Walkley, 2004). In galactosialidosis, two enzymes, lysosomal neuraminidase and -galactosidase, are simultaneously affected because they cannot associate with their missing partner, protective protein/cathepsin A (van der Spoel et al, 1998). Finally, two recessive allelic diseases, Salla disease (OMIM 604369) and infantile sialic acid storage disease (ISSD; OMIM 269920), result from defective free sialic acid transport from lysosomes (Renlund et al, 1986; Mancini et al, 1991; Verheijen et al, 1999; Aula and Gahl, 2001).
ISSD is a very rare worldwide disease clinically characterized by facial dysmorphism, hepatosplenomegaly, failure to thrive, hypotonia and early death (<2 years). Salla disease, which prevails in Finland, primarily affects the CNS with limited somatic findings and near-normal lifespan (Aula and Gahl, 2001). Patients present with hypotonia, ataxia and delayed motor development during the first year. Speech development is impaired in childhood and all adult patients show severe mental retardation. Neuropathological (Autio-Harmainen et al, 1988) and magnetic resonance imaging studies (Haataja et al, 1994; Sonninen et al, 1999) revealed defective myelination in the CNS.
Both diseases are characterized by the presence of swollen lysosomes accumulating free sialic acid, and biochemical experiments on patient cultured cells demonstrated a lack of sialic acid transport across the lysosomal membrane (Aula and Gahl, 2001). Consistently, the causative gene, SLC17A5, was found to encode a novel transmembrane protein, sialin, showing homology to known secondary active transporters (Verheijen et al, 1999) such as the synaptic vesicle glutamate transporters and the renal phosphate transporter NaPi-1—for a review, see Reimer and Edwards (2004). In all, 20 pathogenic mutations of the SLC17A5 gene have been described in the literature (Verheijen et al, 1999; Aula et al, 2000). A substitution of a conserved arginine, R39C, is present in the homozygous or heterozygous state in all known cases of Salla disease, but absent from ISSD. Most Salla disease patients are homozygous for this mutation, while the rarer cases of compound heterozygoty are generally more severely affected (Aula et al, 2000; Biancheri et al, 2002; Varho et al, 2002; Kleta et al, 2003). On the other hand, diverse mutations including large deletions and premature stops, but also missense mutations and a small in-frame deletion ( SSLRN), are observed in ISSD alleles (Verheijen et al, 1999; Aula et al, 2000).
Why different SLC17A5 mutations cause different diseases is currently unknown. Transport measurements on patient lysosomes did not detect significant activity in both diseases (Renlund et al, 1986; Tietze et al, 1989; Mancini et al, 1991). A recent study revealed that the R39C mutation and, to a higher extent, the SSLRN deletion retain sialin in the Golgi and hence reduce its lysosomal localization (Aula et al, 2002). However, it is unknown whether these mutations affect the transport activity, because sialin has been characterized at biochemical (Mancini et al, 1989, 1991; Havelaar et al, 1998), but not at the molecular, level. In this study, we addressed this issue using a novel approach based on the relocalization of recombinant sialin to the plasma membrane by mutagenesis of a sorting motif. The advantage of this approach, which has been successfully applied to the lysosomal cystine transporter cystinosin (Kalatzis et al, 2001), is to create the equivalent of an 'inside-out lysosome' in which the poorly accessible, outward-directed organelle transport is studied as a classical cellular uptake. Interestingly, we found significant functional differences between ISSD- and Salla disease-associated mutants.
Results Identification of a dileucine-based sorting motif
The late endosomal and lysosomal localization of sialin has been recently shown by cell fractionation and immunofluorescence studies (Aula et al, 2002). In order to identify the signals responsible for this localization, we mutated potential sorting motifs in tagged constructs of human sialin. The protein was fused either at its amino-terminus to GFP or at its carboxy-terminus to a V5 epitope. When transiently expressed in HeLa cells, both constructs showed a punctate intracellular distribution, which overlapped with the endogenous late endosomal and lysosomal protein LAMP1 by confocal microscopy (Figure 1A and C). Consistently, when co-expressed, the V5- and GFP-tagged proteins had identical distributions (Figure 1B). These data show that the GFP or V5 tagging do not affect the intracellular localization of sialin. For practical reasons, we used GFP tags throughout this study.
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Discussion The role of sialin in lysosomal efflux of acidic sugars has been inferred from the biochemical and genetical defects of sialic acid storage diseases (Renlund et al, 1986; Tietze et al, 1989; Mancini et al, 1991) and from its sequence homology to other secondary active transporters (Verheijen et al, 1999). In this study, we provide direct evidence of its transport activity, using a whole-cell assay based on sialin missorting, and we show that the transport activity of mutant sialin correlates with the existence of two clinical forms of sialic acid storage disease.
Activity and targeting of the WT protein
Our study identified a dileucine-based sorting motif, DRTPLL, which is critical to the lysosomal and late endosomal localization of sialin. When the motif is mutated, sialin is massively redirected to the plasma membrane (Figures 2 and 3) and, conversely, its introduction into an unrelated plasmalemmal protein triggered internalization and delivery to late endosomes (Supplementary Figure 1). The motif thus plays a major role in sialin trafficking. It follows the consensus sequence [DE]XXXL[LI] and thus may bind one or several of the heterotetrameric adaptor protein complexes (AP-1–AP-4) of coat sorting machineries (Bonifacino and Traub, 2003). Its position in the amino- rather than the carboxy-terminal region of the polypeptide is unusual, but not unique, as VAMP4, the insulin-regulated aminopeptidase and the invariant chain of class II MHC proteins show similar localization.
The fact that the DRTPLL motif is recognized at the plasma membrane (Supplementary Figure 1) implies that sialin can reach lysosomes and late endosomes via an indirect, endocytic route. This route may represent the main pathway followed by sialin. However, since our experiments do not exclude DRTPLL recognition at the TGN in addition to the plasma membrane, the endocytic route may just represent a salvage pathway for a direct, intracellular route. This issue and the possible involvement of other sorting signals need further investigation.
Thus far, all knowledge on lysosomal sialic acid transport resulted from biochemical studies of rat liver lysosomal membranes (Mancini et al, 1989, 1991; Havelaar et al, 1999), of a 57-kDa protein purified from these membranes (Havelaar et al, 1998) or of human lysosomal membranes purified from cultured cells (Mancini et al, 1991). Our study now provides transport data at the molecular level. The activity of recombinant sialin is highly similar to that of lysosomal membranes, since both transports are driven by a downhill H+ gradient (Figure 4C and D) (Mancini et al, 1989, 1991; Havelaar et al, 1998) and both recognize acidic, but not neutral, monosaccharides as well as aliphatic monocarboxylates (Table II and references therein). The inhibition of human sialin by glucuronic acid is also consistent with its accumulation in lysosomes from Salla disease and ISSD patients (Blom et al, 1990).
Our data differ from previous biochemical studies in two minor points, however. First, the Neu5Ac affinity is six-fold lower for the recombinant human protein (KM=1.52 0.26 mM) than for rat membranes (KM=0.24 0.07 mM) (Mancini et al, 1989). This discrepancy should not reflect divergence between mammalian species, since D-glucuronic acid had identical KM values in rat and human membranes (Mancini et al, 1991; Havelaar et al, 1998). One possible explanation is that substrate affinity is decreased in our model because sialin is expressed at an ectopic membrane. Alternatively, the discrepancy may result from topological differences between lysosomal vesicles and our 'inside-out lysosome' model. Indeed, if sialin interacts asymmetrically with Neu5Ac, precisely, if its affinity is better from the cytosolic than from the luminal compartment, studies on randomly oriented vesicles would preferentially detect the process with the highest affinity (cytosol-to-lumen transport), while our assay is selective for the physiological (lumen-to-cytosol) one—for an example of kinetic asymmetry, see Reig et al (2002).
Another discrepancy concerns the effect of dicarboxylates. Havelaar et al (1998) reported that the purified rat transporter is strongly cis-inhibited by succinate and maleate, yet we did not observe any inhibition (Table II). The aforementioned topological differences might again explain this discrepancy, since dicarboxylates had no effect on membrane vesicles when added to the trans-compartment (Havelaar et al, 1998). It should be noted that the biological significance of sialin interaction with aliphatic mono- or dicarboxylates is unclear, because the lysosomal lumen is not expected to generate or import these compounds.
Molecular pathogenesis of free sialic acid storage: why two diseases?
Mutations in the sialin gene result in two diseases, which share a common biochemical defect (the accumulation of free sialic acid in lysosomes) but dramatically differ in their clinical course and symptoms: ISSD is an early fatal disorder, which displays many of the characteristic features of lysosomal disorders, whereas Salla disease is essentially a neurological disorder with near-normal lifespan (Aula and Gahl, 2001). To investigate the molecular basis of these differences, we examined how pathogenic mutations affect sialic acid transport.
We studied five missense mutations and one small in-frame deletion associated either to ISSD or to Salla disease (Verheijen et al, 1999; Aula et al, 2000). One mutation associated with ISSD, G371V, caused aggregation and degradation of the protein (Supplementary Figure 2). The remaining ISSD mutations (H183R, P334R, SSLRN) did not impair expression, but abolished the capacity of the protein to translocate Neu5Ac (Figure 5). Therefore, all these mutations represent loss-of-function mutations, in agreement with the presence of frameshift mutations or large deletions in other ISSD alleles.
In contrast, the mutation responsible for Salla disease, R39C, decreased but did not abolish transport (Figure 5 and Table I), showing a correlation between the molecular and clinical phenotypes. Such a correlation has not been detected thus far, since transport studies on human lysosomes failed to detect any difference between Salla disease and ISSD (Renlund et al, 1986; Tietze et al, 1989; Mancini et al, 1991). Our whole-cell assay thus appears more sensitive than measurements on membrane vesicles. It should be noted that the residual activity of sialin R39C directly explains why Neu5Ac and glucuronic acid accumulate at a lower level in Salla disease than in ISSD (Blom et al, 1990; Aula and Gahl, 2001).
Pathogenic mutations also caused intracellular mislocalization (Figure 6), in agreement with a previous study (Aula et al, 2002). We observed sialin R39C at a perinuclear compartment identified as the Golgi (C Sagné, unpublished data), as well as in LAMP1-negative puncta, which might represent sialin molecules en route to the lysosome (Aula et al (2002), who blocked protein synthesis prior to analysis, did not observe these puncta). SSLRN and H183R induced similar, but apparently stronger, mislocalization. It might be argued that mislocalized sialin, whatever its activity, has some toxic effect, which contributes to the higher severity of ISSD. However, this hypothesis is at variance with our observation that P334R, which abolishes transport and causes ISSD, does not alter intracellular localization. It is important to stress that the mutant proteins, including sialin R39C, partially localized to the lysosome (Figure 6) (Aula et al, 2002). Therefore, the residual activity of the Salla disease mutant implies positive, yet reduced, lysosomal function.
To explore the relationship between the molecular and clinical phenotypes in more detail, we also analysed a mutation (K136E) found in one Salla disease patient but not, to our knowledge, in ISSD (Aula et al, 2000). Clinical studies have distinguished two forms of Salla disease, which correlate to some extent with the genotype: whereas nearly all patients with the classical disease are homozygous for R39C, the rarer cases of 'severe' Salla disease are generally compound heterozygotes with the R39C mutation in one allele and a large deletion, a premature stop, SSLRN or K136E in the other allele (Aula et al, 2000; Biancheri et al, 2002; Kleta et al, 2003). Interestingly, K136E reduced transport as much as R39C at high Neu5Ac concentration (Table I), that is in a situation of sialic acid storage, and it mislocalized sialin apparently more strongly than R39C (Figure 6). The combination of these effects might thus explain the higher severity of Salla disease in the R39C/K136E individual. This pathogenic scenario should be considered with caution, however, because there is still a wide phenotypic variation among R39C homozygotes (Varho et al, 2002).
Physiological implications
In contrast to ISSD, somatic findings such as hydrops fetalis, hepatosplenomegaly and dysostosis multiplex are absent from Salla disease. Growth retardation is limited and facial dysmorphism, when present, occurs at late stages (Aula and Gahl, 2001). The residual activity of sialin R39C thus seems sufficient for most peripheral tissues. On the other hand, the CNS is severely affected, with neurological signs such as hypotonia and ataxia within the first year, mental retardation and defective cerebral myelination (Haataja et al, 1994; Sonninen et al, 1999; Aula and Gahl, 2001). Therefore, our transport measurements suggest that sialin is rate-limiting to specific processes of the brain (it may be noted that, because Vmax is decreased by R39C, sialic acid accumulation in Salla lysosomes cannot compensate for the reduced activity).
An attractive possibility for such sialin-dependent processes is the interaction of gangliosides with the sialic acid-binding lectin siglec-4, also known as myelin-associated glycoprotein (MAG), because it might explain the central dysmyelination observed in sialic acid storage disorders. Indeed, MAG is located at the periaxonal membrane of myelin (Trapp et al, 1989), it binds complex gangliosides of the nerve cell membrane (Collins et al, 1999) and mice lacking either MAG (Schachner and Bartsch, 2000) or complex gangliosides (Sheikh et al, 1999) show selective CNS dysmyelination. Since MAG has a higher affinity for complex (highly sialylated) gangliosides (Collins et al, 1999), decreased sialin activity in the lysosome—or in nonlysosomal structures present in the axon (Aula et al, 2004)—could limit the availability of sialic acid in the cytosol, induce ganglioside hyposialylation and thus impair the axo-glial MAG/ganglioside interaction (see Keppler et al (1999) for a similar mechanism caused by decreased sialic acid biosynthesis). It will thus be important to analyse the sialylation level of brain glycoconjugates when an animal model of Salla disease is available.
Materials and methods cDNA constructs
The IMAGE cDNA clone #3847279, which encodes a full-length human sialin, was obtained from the Deutsches Ressourcenzentrum für Genomforschung (RZPD). Its coding sequence is identical to that described by Verheijen et al (1999) (DDBJ/EMBL/GenBank accession number #AJ387747), except for a silent substitution at the wobble position of codon 82 (GCA instead of GCG). This silent substitution corresponds to a single-nucleotide polymorphism (refSNP ID #rs472294).
All cDNA modifications were performed by PCR using the primers listed in Supplementary Table I. Constructs were verified by automated sequencing over the whole coding sequence. In order to fuse the carboxy-terminus of sialin to a V5 epitope (GKPIPNPLLGLDST), the coding sequence was amplified from the IMAGE cDNA using the primers SIA-7S and SIA-8A, and subcloned at the HindIII and SacII sites of the pcDNA3.1/V5-His-TOPO vector (Invitrogen). Fusion of the amino-terminus to GFP was performed by amplification with the primers SIA-24S and SIA-29A and subcloning at the EcoRI and SacII sites of the pEGFP-C2 vector (Clontech). Eleven mutations were introduced into the sialin coding sequence as described in Supplementary data.
A truncated construct of human CD4 (amino acids 1–396, designated as CD4 Ct) was kindly provided by B Dargent (Garrido et al, 2001). The coding sequence was amplified using the CD4-1S and CD4-2A primers and the product was cloned at the KpnI and NotI sites of pEGFP-N1 (Clontech) in replacement of the GFP sequence. To construct CD4-sialin chimeras, a CD4 product amplified using the CD4-1S and CD4-4A primers was cloned at the KpnI and BamHI sites of pEGFP-N1. The sequence for the N-terminal domain of sialin, obtained using primers SIA-26S and SIA-27A, was then introduced at the BamHI and NotI sites in replacement of EGFP.
Cell culture and transfection
HeLa and HEK 293 cells were grown under 5% CO2 in glucose-rich, Glutamax-I-containing Dulbecco's modified Eagle medium (DMEM; Invitrogen) supplemented with 7.5% foetal bovine serum, 100 U/ml penicillin and 100 g/ml streptomycin.
HeLa cells were transfected by electroporation using a GHT 1287 electropulsator (Jouan). Typically, 2 106 HeLa cells in 50 l of ice-cold phosphate-buffered saline (PBS; pH 7.4) were mixed with 5 g plasmid, immediately subjected to nine square pulses (200 V, 3 ms) delivered at 1 Hz by 4-mm-spaced electrodes, diluted with 6 ml of culture medium and distributed in 12 wells (15-mm diameter) of a 24-well culture plate. HEK 293 cells were plated (300 000 cells/well) into poly-D-lysine-coated 24-well plates and transfected on the following day with Lipofectamine™ 2000 (Invitrogen) according to the manufacturer's protocol. HeLa and HEK293 cells were analysed 2 or 3 days after transfection.
Immunofluorescence analysis
Cells grown on glass coverslips were washed with PBS containing 100 M MgCl2 and 100 M CaCl2 (PBS/Ca/Mg), and fixed with 4% paraformaldehyde (PFA; Sigma) for 10 min. After washing and quenching PFA with 50 mM NH4Cl for 15 min, cells were washed with PBS and permeabilized in blocking buffer (0.05% saponin/0.2% BSA in PBS/Ca/Mg) for 20 min. Coverslips were then incubated for at least 1 h with primary antibodies in blocking buffer, washed with PBS, incubated for 1 h with secondary antibodies in the same buffer and rinsed with PBS and water. Coverslips were mounted on glass slides with Mowiol. All steps were performed at room temperature. The following antibodies were used at the indicated dilutions: mouse anti-V5-tag (Serotec) 1 g/ml, rabbit anti-V5 (Chemicon) 0.2 g/ml, mouse anti-LAMP1 (H4A3; Developmental Studies Hybridoma Bank, University of Iowa) 0.75 g/ml, Cy3-conjugated donkey anti-mouse (Jackson Immunoresearch) 1.4 g/ml, Alexa Fluor 488-conjugated goat anti-rabbit (Molecular Probes) 4 g/ml and Alexa Fluor 568-conjugated goat anti-mouse (Molecular Probes) 2 g/ml.
Epifluorescence pictures were acquired under a 100 objective lens with a Leica DM RXA2 microscope equipped with a CCD camera (Coolsnap). For comparing the cellular distribution of two markers, pictures were either acquired with a spectral confocal Leica TCS/SP2 microscope or epifluorescence data were deconvoluted. Sections for deconvolution microscopy were collected throughout the cell using a z-axis focus drive with a spacing of 0.2 m. Stacked images were deconvoluted using the PSF-based Iterative 3D Deconvolution module of the Metamorph software (Universal Imaging Corporation). All images were processed using Adobe Photoshop.
Endocytosis assay
HeLa cells transfected with CD4 constructs were briefly washed with ice-cold DMEM and incubated for 30 min at 4°C with the mouse monoclonal anti-CD4 antibodies SIM.2 or SIM.4 (NIH AIDS Research and Reference Reagent Program) diluted in DMEM at 65 and 25 ng/ml, respectively. Coverslips were then washed extensively with ice-cold PBS, transferred to 37°C-prewarmed DMEM and incubated for increasing periods of time in the air/CO2 incubator. To remove SIM.4 antibodies bound to the cell surface (acid wash), cells were incubated for 5 min at 4°C in 0.5 M NaCl and 0.2 M acetic acid (pH 2.6). Cells were fixed with PFA and processed for immunofluorescence as described above.
Sialic acid transport
HEK 293 cells were washed twice with 500 l of uptake buffer A (5 mM D-glucose, 140 mM NaCl, 1 mM MgSO4, 20 mM K+-phosphate pH 7.4) and incubated for 15 min at room temperature in 200 l of uptake buffer A or B (identical to buffer A, but adjusted to pH 5.6) containing 0.1 Ci N-acetyl-[6-3H]neuraminic acid (20 Ci/mmol; American Radiolabeled Chemicals). The reaction was stopped by aspiration of the uptake medium, followed by two brief washes with 500 l of ice-cold uptake buffer at the corresponding pH. Cells were lysed in 200 l 0.1 N NaOH and the accumulated radioactivity was counted in Emulsifier-Safe cocktail (Packard) using a Tri-Carb 2100 TR liquid scintillation analyzer (Packard). Transport was studied at other pH values by replacing phosphate by 10 mM MES or MOPS. Saturation kinetics experiments performed at pH 5.0 (MES buffer) were carried out with shorter incubations (6 min) to measure transport velocities. All compounds used for inhibition studies were obtained from Sigma. Measurements were carried out in triplicate and are expressed as means s.e.m. Each experiment was performed three or more times on independent transfections. Michaelis–Menten kinetic parameters were derived by nonlinear regression of untransformed data using the SigmaPlot 8.0 software (Systat Software, Inc.).
Western blot analysis
HEK 293 cells were chilled on ice, rinsed twice with PBS and scraped in 2 ml PBS containing protease inhibitors (5 g/ml aprotinin, 5 g/ml leupeptin, 5 g/ml pepstatin and 1 mM PMSF). Cells were centrifuged at 1000 g for 10 min at 4°C and pellets were immediately frozen in liquid nitrogen and stored at -20°C. Pellets were solubilized in Laemmli's sample buffer containing Benzonase (Merck) and the equivalent of 7 105 cells was loaded directly onto a 10% SDS–PAGE gel. The separated proteins were electrotransferred to a nitrocellulose membrane and, after blocking for 1 h in PBS containing 5% nonfat dry milk, the membrane was incubated for 1 h at room temperature with a 1:1000 dilution of mouse anti-GFP antibody (Roche Applied Science), washed three times in 0.05% Tween/PBS and incubated for 1 h at room temperature with a 1:100 000 dilution of horseradish peroxidase-conjugated antibodies against mouse whole immunoglobulins (Jackson Immunoresearch). Immune complexes were detected using the Lumi-lightPLUS Western Blotting Substrate (Roche). When specified, the membrane was stripped and re-probed with an anti- actin monoclonal antibody (clone AC-74, Sigma).
Quantitative Western blot analysis was performed using 125I-labelled sheep anti-mouse Ig antibody (Amersham Biosciences) as secondary antibody. The membrane was incubated for 1 h in 0.05% Tween/PBS with a 1:500 dilution (0.2 Ci/ml) of radiolabelled antibody. After washing, the membrane was exposed overnight to a Storage Phosphor Screen (Kodak). After scanning with a Phosphorimager 400E instrument (Molecular Dynamics), the signal associated to each immunoreactive band was determined using the ImageQuant software (Molecular Dynamics).
Cell surface biotinylation
At 2 days after transfection, 2 106 HEK293 cells were washed twice with ice-cold PBS/Ca/Mg and biotinylated for 30 min at 4°C using 1 mg/ml of the cell-impermeant, cleavable reagent sulpho-NHS-SS-biotin (Pierce) in PBS/Ca/Mg. Unbound biotin was quenched for 20 min at 4°C with 100 mM glycine in PBS/Ca/Mg. After two washes, cells were lysed for 1 h in 200 l lysis buffer (150 mM NaCl, 5 mM EDTA, 50 mM Tris–HCl (pH 7.5), 0.1% SDS, 1% Triton X-100, 1 mM PMSF, 0.1 mM leupeptin, 0.1 M pepstatin A). The cell lysate (0.2 mg protein in 600 l) was clarified by sedimentation at 14 000 r.p.m. for 10 min and the supernatant was incubated for 2 h at 4°C with 50 l streptavidin–agarose beads (Sigma) under gentle agitation. The beads were sedimented at 1000 r.p.m. for 30 s. The supernatant (unbound material) was recovered and beads were washed three times with 1 ml lysis buffer, once with 500 mM NaCl and 50 mM Tris–HCl (pH 7.5), and once with 10 mM Tris/HCl (pH 7.5). The bound material was eluted in 50 l Laemmli's sample buffer. The totality of bound proteins and an aliquot of unbound proteins or cell lysate (30 l from the total volume of 600 l) were resolved by SDS–PAGE and analysed by immunoblotting with anti-GFP antibodies.
Supplementary data
Supplementary data are available at The EMBO Journal Online.
Acknowledgements
We thank B Dargent for the CD4 Ct construct, V Fraisier and JB Sibarita for help in 3D deconvolution microscopy and F Darchen, JP Henry and A Schmidt for advice or critical comments on the manuscript. We acknowledge the NICHD Developmental Studies Hybridoma Bank, the NIH AIDS Research and Reference Reagent Program and the Deutsches Ressourcenzentrum für Genomforschung for reagents. This study was supported by the Centre National de la Recherche Scientifique, the charity Vaincre les Maladies Lysosomales (postdoctoral fellowship to PM and research grant to BG) and the Fonds National de la Science (Action Concertée Incitative 'Biologie cellulaire, moléculaire et structurale' to BG).
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