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Figure 5
Structural comparison of RecQ C to representative helicases belonging to the SF1 and SF2 helicase superfamilies. (A) Structures of PcrA (Subramanya et al., 1996) and NS3 (Yao et al., 1997), SF1 and SF2 helicases, respectively, were superimposed on RecQ C using the structurally related C atoms in their N-terminal most helicase subdomains (in red) and then translated to allow visual comparison. Red and blue colors mark the conserved RecA-like folds found in the helicase subdomains of each protein, while grey coloration indicates sequences outside of the RecA fold. An orthogonal view is shown of each protein below the top row. (B) Topology diagrams of PcrA, RecQ C and NS3. Colors are shown as in (A), with RecQ C's Zn2+ in magenta. Helices and -strands in RecQ C are labeled as in Figure 1B. Diagrams of PcrA and NS3 were adapted from Caruthers and McKay (2002).
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