Table of Contents : The EMBO Journal

Volume 20, Number 8
17 April 2001

pp 1819-2108

Cover. A confocal micrograph of cultured primary rat neonatal ventriculocytes following induction of hypertrophy after exposure to phenylephrine. Dodge et al. have demonstrated the formation of a signaling complex in heart tissues that includes mAKAP (blue), cAMP-dependent protein kinase A (PKA) and cAMP-specific phosphodiesterase (PDE4D3; green), to maintain a negative feedback loop. Actin (red) displays a characteristic pattern associated with hypertrophy in these cells. Imaging was carried out in a BioRad MRC1024UV/VIS confocal microscope. John D.Scott is a Howard Hughes Medical Institute Associate Investigator and a Senior Scientist at the Vollum Institute in Portland, Oregon. For further details see Dodge et al., pages 1921--1930.

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Articles
Top of page
- Structural and functional studies of MinD ATPase: implications for the molecular recognition of the bacterial cell division apparatus FREE
  Ikuko Hayashi, Takuji Oyama and Kosuke Morikawa
  The EMBO Journal (2001), 20, - 1819 - 1828, doi:10.1093/emboj/20.8.1819
  - Abstract - Structural and functional studies of MinD ATPase: implications for the molecular recognition of the bacterial cell division apparatus
  - Full text
  - PDF (454 KB) - Structural and functional studies of MinD ATPase: implications for the molecular recognition of the bacterial cell division apparatus
- Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3 FREE
  Marta Pioletti, Frank Schlünzen, Jörg Harms, Raz Zarivach, Marco Glühmann, Horacio Avila, Anat Bashan, Heike Bartels, Tamar Auerbach, Carsten Jacobi, Thomas Hartsch, Ada Yonath and François Franceschi
  The EMBO Journal (2001), 20, - 1829 - 1839, doi:10.1093/emboj/20.8.1829
  - Abstract - Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3
  - Full text
  - PDF (556 KB) - Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3
- Expression of microbial virulence proteins in Saccharomyces cerevisiae models mammalian infection FREE
  Cammie F. Lesser and Samuel I. Miller
  The EMBO Journal (2001), 20, - 1840 - 1849, doi:10.1093/emboj/20.8.1840
  - Abstract - Expression of microbial virulence proteins in : Saccharomyces cerevisiae: models mammalian infection
  - Full text
  - PDF (267 KB) - Expression of microbial virulence proteins in : Saccharomyces cerevisiae: models mammalian infection
- Type III secretion chaperone-dependent regulation: activation of virulence genes by SicA and InvF in Salmonella typhimurium FREE
  K.Heran Darwin and Virginia L. Miller
  The EMBO Journal (2001), 20, - 1850 - 1862, doi:10.1093/emboj/20.8.1850
  - Abstract - Type III secretion chaperone-dependent regulation: activation of virulence genes by SicA and InvF in : Salmonella typhimurium
  - Full text
  - PDF (289 KB) - Type III secretion chaperone-dependent regulation: activation of virulence genes by SicA and InvF in : Salmonella typhimurium
- Perinuclear, perigranular and sub-plasmalemmal mitochondria have distinct functions in the regulation of cellular calcium transport FREE
  Myoung Kyu Park, Michael C. Ashby, Gul Erdemli, Ole H. Petersen and Alexei V. Tepikin
  The EMBO Journal (2001), 20, - 1863 - 1874, doi:10.1093/emboj/20.8.1863
  - Abstract - Perinuclear, perigranular and sub-plasmalemmal mitochondria have distinct functions in the regulation of cellular calcium transport
  - Full text
  - PDF (695 KB) - Perinuclear, perigranular and sub-plasmalemmal mitochondria have distinct functions in the regulation of cellular calcium transport
- The Arabidopsis thaliana ABC transporter AtMRP5 controls root development and stomata movement FREE
  Nicola Gaedeke, Markus Klein, Uener Kolukisaoglu, Cyrille Forestier, Axel Müller, Mark Ansorge, Dirk Becker, Yasmine Mamnun, Karl Kuchler, Burkhard Schulz, Bernd Mueller-Roeber and Enrico Martinoia
  The EMBO Journal (2001), 20, - 1875 - 1887, doi:10.1093/emboj/20.8.1875
  - Abstract - The : Arabidopsis thaliana: ABC transporter : At: MRP5 controls root development and stomata movement
  - Full text
  - PDF (684 KB) - The : Arabidopsis thaliana: ABC transporter : At: MRP5 controls root development and stomata movement
  - Supplementary information
- Structural and functional differences between two homologous mechanosensitive channels of Methanococcus jannaschii FREE
  Anna Kloda and Boris Martinac
  The EMBO Journal (2001), 20, - 1888 - 1896, doi:10.1093/emboj/20.8.1888
  - Abstract - Structural and functional differences between two homologous mechanosensitive channels of : Methanococcus jannaschii
  - Full text
  - PDF (402 KB) - Structural and functional differences between two homologous mechanosensitive channels of : Methanococcus jannaschii
- The Wilms tumor suppressor WT1 directs stage-specific quiescence and differentiation of human hematopoietic progenitor cells FREE
  Leif W. Ellisen, Nadia Carlesso, Tao Cheng, David T. Scadden and Daniel A. Haber
  The EMBO Journal (2001), 20, - 1897 - 1909, doi:10.1093/emboj/20.8.1897
  - Abstract - The Wilms tumor suppressor WT1 directs stage-specific quiescence and differentiation of human hematopoietic progenitor cells
  - Full text
  - PDF (510 KB) - The Wilms tumor suppressor WT1 directs stage-specific quiescence and differentiation of human hematopoietic progenitor cells
- Mitochondria-to-nucleus stress signaling induces phenotypic changes, tumor progression and cell invasion FREE
  Govindasamy Amuthan, Gopa Biswas, Shi-Yu Zhang, Andres Klein-Szanto, C. Vijayasarathy and Narayan G. Avadhani
  The EMBO Journal (2001), 20, - 1910 - 1920, doi:10.1093/emboj/20.8.1910
  - Abstract - Mitochondria-to-nucleus stress signaling induces phenotypic changes, tumor progression and cell invasion
  - Full text
  - PDF (523 KB) - Mitochondria-to-nucleus stress signaling induces phenotypic changes, tumor progression and cell invasion
- mAKAP assembles a protein kinase A/PDE4 phosphodiesterase cAMP signaling module FREE
  Kimberly L. Dodge, Samone Khouangsathiene, Michael S. Kapiloff, Robert Mouton, Elaine V. Hill, Miles D. Houslay, Lorene K. Langeberg and John D. Scott
  The EMBO Journal (2001), 20, - 1921 - 1930, doi:10.1093/emboj/20.8.1921
  - Abstract - mAKAP assembles a protein kinase A/PDE4 phosphodiesterase cAMP signaling module
  - Full text
  - PDF (360 KB) - mAKAP assembles a protein kinase A/PDE4 phosphodiesterase cAMP signaling module
- p53 induction of heparin-binding EGF-like growth factor counteracts p53 growth suppression through activation of MAPK and PI3K/Akt signaling cascades FREE
  Li Fang, Guangnan Li, Guizhong Liu, Sam W. Lee and Stuart A. Aaronson
  The EMBO Journal (2001), 20, - 1931 - 1939, doi:10.1093/emboj/20.8.1931
  - Abstract - p53 induction of heparin-binding EGF-like growth factor counteracts p53 growth suppression through activation of MAPK and PI3K/Akt signaling cascades
  - Full text
  - PDF (309 KB) - p53 induction of heparin-binding EGF-like growth factor counteracts p53 growth suppression through activation of MAPK and PI3K/Akt signaling cascades
- MEK kinase activity is not necessary for Raf-1 function FREE
  Martin Hüser, Jeni Luckett, Antonio Chiloeches, Kathryn Mercer, Mabel Iwobi, Susan Giblett, Xiao-Ming Sun, Jane Brown, Richard Marais and Catrin Pritchard
  The EMBO Journal (2001), 20, - 1940 - 1951, doi:10.1093/emboj/20.8.1940
  - Abstract - MEK kinase activity is not necessary for Raf-1 function
  - Full text
  - PDF (508 KB) - MEK kinase activity is not necessary for Raf-1 function
  - Supplementary information
- Embryonic lethality and fetal liver apoptosis in mice lacking the c-raf-1 gene FREE
  Mario Mikula, Martin Schreiber, Zvenislava Husak, Lucia Kucerova, Jochen Rüth, Rotraud Wieser, Kurt Zatloukal, Hartmut Beug, Erwin F. Wagner and Manuela Baccarini
  The EMBO Journal (2001), 20, - 1952 - 1962, doi:10.1093/emboj/20.8.1952
  - Abstract - Embryonic lethality and fetal liver apoptosis in mice lacking the c-: raf-1: gene
  - Full text
  - PDF (546 KB) - Embryonic lethality and fetal liver apoptosis in mice lacking the c-: raf-1: gene
- Loss of the maintenance methyltransferase, xDnmt1, induces apoptosis in Xenopus embryos FREE
  Irina Stancheva, Carmel Hensey and Richard R. Meehan
  The EMBO Journal (2001), 20, - 1963 - 1973, doi:10.1093/emboj/20.8.1963
  - Abstract - Loss of the maintenance methyltransferase, xDnmt1, induces apoptosis in : Xenopus: embryos
  - Full text
  - PDF (335 KB) - Loss of the maintenance methyltransferase, xDnmt1, induces apoptosis in : Xenopus: embryos
- Glucocorticoid-induced DNA demethylation and gene memory during development FREE
  Hélène Thomassin, Michèle Flavin, Maria-Luisa Espinás and Thierry Grange
  The EMBO Journal (2001), 20, - 1974 - 1983, doi:10.1093/emboj/20.8.1974
  - Abstract - Glucocorticoid-induced DNA demethylation and gene memory during development
  - Full text
  - PDF (247 KB) - Glucocorticoid-induced DNA demethylation and gene memory during development
- Transcription factor-dependent regulation of CBP and P/CAF histone acetyltransferase activity FREE
  Evi Soutoglou, Benoit Viollet, Martine Vaxillaire, Moshe Yaniv, Marco Pontoglio and Iannis Talianidis
  The EMBO Journal (2001), 20, - 1984 - 1992, doi:10.1093/emboj/20.8.1984
  - Abstract - Transcription factor-dependent regulation of CBP and P/CAF histone acetyltransferase activity
  - Full text
  - PDF (310 KB) - Transcription factor-dependent regulation of CBP and P/CAF histone acetyltransferase activity
- Saccharomyces cerevisiae Elongator mutations confer resistance to the Kluyveromyces lactis zymocin FREE
  Frank Frohloff, Lars Fichtner, Daniel Jablonowski, Karin D. Breunig and Raffael Schaffrath
  The EMBO Journal (2001), 20, - 1993 - 2003, doi:10.1093/emboj/20.8.1993
  - Abstract - Saccharomyces cerevisiae: Elongator mutations confer resistance to the : Kluyveromyces lactis: zymocin
  - Full text
  - PDF (306 KB) - Saccharomyces cerevisiae: Elongator mutations confer resistance to the : Kluyveromyces lactis: zymocin
- ATP-dependent chromatin remodeling facilitates nucleotide excision repair of UV-induced DNA lesions in synthetic dinucleosomes FREE
  Kiyoe Ura, Marito Araki, Hideaki Saeki, Chikahide Masutani, Takashi Ito, Shigenori Iwai, Toshimi Mizukoshi, Yasufumi Kaneda and Fumio Hanaoka
  The EMBO Journal (2001), 20, - 2004 - 2014, doi:10.1093/emboj/20.8.2004
  - Abstract - ATP-dependent chromatin remodeling facilitates nucleotide excision repair of UV-induced DNA lesions in synthetic dinucleosomes
  - Full text
  - PDF (378 KB) - ATP-dependent chromatin remodeling facilitates nucleotide excision repair of UV-induced DNA lesions in synthetic dinucleosomes
- Dimerization of the largest subunit of chromatin assembly factor 1: importance in vitro and during Xenopus early development FREE
  Jean-Pierre Quivy, Paola Grandi and Geneviève Almouzni
  The EMBO Journal (2001), 20, - 2015 - 2027, doi:10.1093/emboj/20.8.2015
  - Abstract - Dimerization of the largest subunit of chromatin assembly factor 1: importance : in vitro: and during : Xenopus: early development
  - Full text
  - PDF (741 KB) - Dimerization of the largest subunit of chromatin assembly factor 1: importance : in vitro: and during : Xenopus: early development
- MOT1-catalyzed TBP–DNA disruption: uncoupling DNA conformational change and role of upstream DNA FREE
  Russell P. Darst, Dongyan Wang and David T. Auble
  The EMBO Journal (2001), 20, - 2028 - 2040, doi:10.1093/emboj/20.8.2028
  - Abstract - MOT1-catalyzed TBP-DNA disruption: uncoupling DNA conformational change and role of upstream DNA
  - Full text
  - PDF (353 KB) - MOT1-catalyzed TBP-DNA disruption: uncoupling DNA conformational change and role of upstream DNA
- The structural basis of acyl coenzyme A-dependent regulation of the transcription factor FadR FREE
  Daan M F van Aalten, Concetta C DiRusso and Jens Knudsen
  The EMBO Journal (2001), 20, - 2041 - 2050, doi:10.1093/emboj/20.8.2041
  - Abstract - The structural basis of acyl coenzyme A-dependent regulation of the transcription factor FadR
  - Full text
  - PDF (621 KB) - The structural basis of acyl coenzyme A-dependent regulation of the transcription factor FadR
- Visualizing the solvent-inaccessible core of a group II intron ribozyme FREE
  Jennifer Swisher, Carlos M. Duarte, Linhui Julie Su and Anna Marie Pyle
  The EMBO Journal (2001), 20, - 2051 - 2061, doi:10.1093/emboj/20.8.2051
  - Abstract - Visualizing the solvent-inaccessible core of a group II intron ribozyme
  - Full text
  - PDF (377 KB) - Visualizing the solvent-inaccessible core of a group II intron ribozyme
- The Y14 protein communicates to the cytoplasm the position of exon–exon junctions FREE
  V.Narry Kim, Jeongsik Yong, Naoyuki Kataoka, Linda Abel, Michael D. Diem and Gideon Dreyfuss
  The EMBO Journal (2001), 20, - 2062 - 2068, doi:10.1093/emboj/20.8.2062
  - Abstract - The Y14 protein communicates to the cytoplasm the position of exon-exon junctions
  - Full text
  - PDF (224 KB) - The Y14 protein communicates to the cytoplasm the position of exon-exon junctions
- SDE3 encodes an RNA helicase required for post-transcriptional gene silencing in Arabidopsis FREE
  Tamas Dalmay, Rob Horsefield, Thomas Hartig Braunstein and David C. Baulcombe
  The EMBO Journal (2001), 20, - 2069 - 2077, doi:10.1093/emboj/20.8.2069
  - Abstract - SDE3: encodes an RNA helicase required for post-transcriptional gene silencing in : Arabidopsis
  - Full text
  - PDF (598 KB) - SDE3: encodes an RNA helicase required for post-transcriptional gene silencing in : Arabidopsis
  - Supplementary information
- The active sites of the influenza cap-dependent endonuclease are on different polymerase subunits FREE
  Mei-Ling Li, Ping Rao and Robert M. Krug
  The EMBO Journal (2001), 20, - 2078 - 2086, doi:10.1093/emboj/20.8.2078
  - Abstract - The active sites of the influenza cap-dependent endonuclease are on different polymerase subunits
  - Full text
  - PDF (206 KB) - The active sites of the influenza cap-dependent endonuclease are on different polymerase subunits
- A 330 kb CENP-A binding domain and altered replication timing at a human neocentromere FREE
  Anthony W.I. Lo, Jeffrey M. Craig, Richard Saffery, Paul Kalitsis, Danielle V. Irvine, Elizabeth Earle, Dianna J. Magliano and K.H.Andy Choo
  The EMBO Journal (2001), 20, - 2087 - 2096, doi:10.1093/emboj/20.8.2087
  - Abstract - A 330 kb CENP-A binding domain and altered replication timing at a human neocentromere
  - Full text
  - PDF (295 KB) - A 330 kb CENP-A binding domain and altered replication timing at a human neocentromere
  - Supplementary information
- Sld3, which interacts with Cdc45 (Sld4), functions for chromosomal DNA replication in Saccharomyces cerevisiae FREE
  Yoichiro Kamimura, Yon-Soo Tak, Akio Sugino and Hiroyuki Araki
  The EMBO Journal (2001), 20, - 2097 - 2107, doi:10.1093/emboj/20.8.2097
  - Abstract - Sld3, which interacts with Cdc45 (Sld4), functions for chromosomal DNA replication in : Saccharomyces cerevisiae
  - Full text
  - PDF (439 KB) - Sld3, which interacts with Cdc45 (Sld4), functions for chromosomal DNA replication in : Saccharomyces cerevisiae
Corrigendum
Top of page
- TTF-2, a new forkhead protein, shows a temporal expression in the developing thyroid which is consistent with a role controlling the onset of differentiation FREE
  M. Zannini, V. Avantaggiato, E. Biffali, M.I. Arnone, K. Sato, M. Pischetola, B.A. Taylor, S.J. Phillips, A. Simeone and R. Di Lauro
  The EMBO Journal (2001), 20, - 2108, doi:10.1093/emboj/20.8.2108
  - Full text
  - PDF (56 KB) - TTF-2, a new forkhead protein, shows a temporal expression in the developing thyroid which is consistent with a role controlling the onset of differentiation

Table of Contents

Volume 20, Number 8 17 April 2001

Articles

Structural and functional studies of MinD ATPase: implications for the molecular recognition of the bacterial cell division apparatus FREE

Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3 FREE

Expression of microbial virulence proteins in Saccharomyces cerevisiae models mammalian infection FREE

Type III secretion chaperone-dependent regulation: activation of virulence genes by SicA and InvF in Salmonella typhimurium FREE

Perinuclear, perigranular and sub-plasmalemmal mitochondria have distinct functions in the regulation of cellular calcium transport FREE

The Arabidopsis thaliana ABC transporter AtMRP5 controls root development and stomata movement FREE

Structural and functional differences between two homologous mechanosensitive channels of Methanococcus jannaschii FREE

The Wilms tumor suppressor WT1 directs stage-specific quiescence and differentiation of human hematopoietic progenitor cells FREE

Mitochondria-to-nucleus stress signaling induces phenotypic changes, tumor progression and cell invasion FREE

mAKAP assembles a protein kinase A/PDE4 phosphodiesterase cAMP signaling module FREE

p53 induction of heparin-binding EGF-like growth factor counteracts p53 growth suppression through activation of MAPK and PI3K/Akt signaling cascades FREE

MEK kinase activity is not necessary for Raf-1 function FREE

Embryonic lethality and fetal liver apoptosis in mice lacking the c-raf-1 gene FREE

Loss of the maintenance methyltransferase, xDnmt1, induces apoptosis in Xenopus embryos FREE

Glucocorticoid-induced DNA demethylation and gene memory during development FREE

Transcription factor-dependent regulation of CBP and P/CAF histone acetyltransferase activity FREE

Saccharomyces cerevisiae Elongator mutations confer resistance to the Kluyveromyces lactis zymocin FREE

ATP-dependent chromatin remodeling facilitates nucleotide excision repair of UV-induced DNA lesions in synthetic dinucleosomes FREE

Dimerization of the largest subunit of chromatin assembly factor 1: importance in vitro and during Xenopus early development FREE

MOT1-catalyzed TBP–DNA disruption: uncoupling DNA conformational change and role of upstream DNA FREE

The structural basis of acyl coenzyme A-dependent regulation of the transcription factor FadR FREE

Visualizing the solvent-inaccessible core of a group II intron ribozyme FREE

The Y14 protein communicates to the cytoplasm the position of exon–exon junctions FREE

SDE3 encodes an RNA helicase required for post-transcriptional gene silencing in Arabidopsis FREE

The active sites of the influenza cap-dependent endonuclease are on different polymerase subunits FREE

A 330 kb CENP-A binding domain and altered replication timing at a human neocentromere FREE

Sld3, which interacts with Cdc45 (Sld4), functions for chromosomal DNA replication in Saccharomyces cerevisiae FREE

Corrigendum

TTF-2, a new forkhead protein, shows a temporal expression in the developing thyroid which is consistent with a role controlling the onset of differentiation FREE

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Volume 20, Number 8
17 April 2001