Article

European Journal of Human Genetics (2008) 16, 1388–1395; doi:10.1038/ejhg.2008.100; published online 21 May 2008

Testing replication of a 5-SNP set for general cognitive ability in six population samples

Michelle Luciano1,7, Penelope A Lind1,2,7, Ian J Deary1, Antony Payton3, Danielle Posthuma4, Lee M Butcher5, Zoltan Bochdanovits4, Lawrence J Whalley6, Peter M Visscher2, Sarah E Harris1, Tinca J C Polderman4, Oliver S P Davis5, Margaret J Wright2, John M Starr1, Eco J C de Geus4, Timothy C Bates1, Grant W Montgomery2, Dorret I Boomsma4, Nicholas G Martin2 and Robert Plomin5

  1. 1Department of Psychology, MRC Centre for Cognitive Ageing and Cognitive Epidemiology, University of Edinburgh, Edinburgh, UK
  2. 2Genetic Epidemiology, Queensland Institute of Medical Research, Brisbane, Queensland, Australia
  3. 3School of Medicine, The University of Manchester, Manchester, UK
  4. 4Biological Psychology, Vrije Universiteit of Amsterdam, Amsterdam, The Netherlands
  5. 5King's College London, Institute of Psychiatry, London, UK
  6. 6Mental Health, University of Aberdeen, Aberdeen, UK

Correspondence: Dr M Luciano, Department of Psychology, MRC Centre for Cognitive Ageing and Cognitive Epidemiology, University of Edinburgh, 7 George Square, Edinburgh, Lothian EH8 9JZ, UK. Tel: +44 131 651 5040; Fax: +44 131 651 1771; E-mail: michelle.luciano@ed.ac.uk

7The authors wish it to be known that, in their opinion, the first 2 authors should be regarded as joint First Authors

Received 30 October 2007; Revised 11 March 2008; Accepted 17 April 2008; Published online 21 May 2008.

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Abstract

A 5-single nucleotide polymorphism (SNP) set has been associated with general cognitive ability in 5000 7-year-old children from the Twins Early Development Study (TEDS). Four of these SNPs were identified through a 10 K microarray analysis and one was identified through a targeted analysis of brain-expressed genes. The present study tested this association with general cognitive ability in six population samples of varying size and age from Australia, the UK (Scotland and England) and the Netherlands. Results from the largest sample (N=1310) approached significance (P=0.06) in the direction of the original finding, but results from the other samples (N=205–758) were mixed. A meta-analysis of the results – allowing for effect size heterogeneity between samples – yielded a non-significant correlation (r=-0.01, P=0.57), indicating that this SNP set was not associated with general cognitive ability in the populations studied.

Keywords:

SNP set, cognitive ability, replication

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