Article

European Journal of Human Genetics (2006) 14, 1027–1036. doi:10.1038/sj.ejhg.5201662; published online 14 June 2006

ADAM33 haplotypes are associated with asthma in a large Australian population

Mary-Anne Kedda1,2,3,4,5,6,9, David L Duffy7,9, Bernadette Bradley1,2,3,4, Robyn E O'Hehir1,8 and Philip J Thompson1,2,3

  1. 1The Co-operative Research Centre (CRC) for Asthma, Sydney, Australia
  2. 2The Asthma and Allergy Research Institute (Inc.), Sir Charles Gairdner Hospital, Nedlands, Western Australia, Australia
  3. 3The Centre for Asthma, Allergy and Respiratory Research, University of Western Australia, Western Australia, Australia
  4. 4The Western Australian Institute for Medical Research and Centre for Medical Research, Perth, Australia
  5. 5School of Public Health, Queensland University of Technology, Brisbane, Australia
  6. 6School of Life Sciences and Institute of Health and Biomedical Innovation, Queensland University of Technology, Brisbane, Australia
  7. 7Genetic Epidemiology Laboratory, Queensland Institute of Medical Research, Brisbane, Australia
  8. 8Department of Allergy, Immunology and Respiratory Medicine, The Alfred Hospital and Monash University, Melbourne, Australia

Correspondence: Professor PJ Thompson, Asthma and Allergy Research Institute, Ground Floor E Block, Sir Charles Gairdner Hospital, Nedlands, WA, 6009, Australia. Tel: +61 (0)8 9346 3198; Fax: +61 (0)8 9346 4159; E-mail: aari@aari.uwa.edu.au

9These authors contributed equally to this paper

Received 22 June 2004; Revised 7 March 2006; Accepted 13 April 2006; Published online 14 June 2006.

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Abstract

The ADAM33 gene has recently been identified as being a potentially important asthma candidate gene, and polymorphisms in this gene have been shown to be associated with asthma and bronchial hyperresponsiveness in Caucasian individuals from several populations. We performed chip-based matrix-assisted laser desorption/ionisation time-of-flight (MALDI-TOF) mass spectrometry using the MassARRAY system and multiplexed genotyping assays to investigate the association between 10 single nucleotide polymorphisms (SNPs) in the ADAM33 gene (F_+1, Q_-1, S_1, ST_+4, ST_+7, V_-2, V_-1, V_2, V_4, V_5) and asthma and asthma severity in a large Australian Caucasian population of nonasthmatic controls (n=473), and patients with mild (n=292), moderate (n=238) and severe (n=82) asthma. No significant association was found between any one of the 10 SNPs and asthma or asthma severity, however, there was a significant global haplotypic association with asthma (P=0.0002) and disease severity (P=0.0001), driven by the combination of two key SNPs, V_-1 and ST_+7. A meta-analysis of all the genetic studies conducted to date found significant between-study heterogeneity, likely to reflect population stratification. Our analysis of ADAM33 haplotypes further suggests a likely role for ADAM33 in the asthma phenotype, although it does not exclude an association with another locus in linkage disequilibrium with ADAM33.

Keywords:

polymorphism, MALDI-TOF, asthma, ADAM33, haplotype

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