Article

European Journal of Human Genetics (2005) 13, 763–771. doi:10.1038/sj.ejhg.5201406 Published online 6 April 2005

Fine mapping of a schizophrenia susceptibility locus at chromosome 6q23: increased evidence for linkage and reduced linkage interval

Adi Levi1, Yoav Kohn1, Kyra Kanyas1, Daniela Amann2, Chi-Un Pae3, Adnan Hamdan4, Ronnen H Segman1, Nili Avidan2, Osnat Karni1, Mira Korner5, Tae-Yun Jun3, Jacques S Beckmann2,6, Fabio Macciardi7 and Bernard Lerer1

  1. 1Biological Psychiatry Laboratory, Department of Psychiatry, Hadassah-Hebrew University Medical Center, Jerusalem, Israel
  2. 2Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel
  3. 3St. Mary's Hospital, Catholic University of Korea, Seoul, Korea
  4. 4Regional Mental Health Center, Taibe, Israel
  5. 5Center for Genomic Technologies, Hebrew University of Jerusalem, Israel
  6. 6Dépt de Génétique Médicale, Lausanne-CHUV, Switzerland
  7. 7Center for Addiction and Mental Health, University of Toronto, Canada

Correspondence: Prof Bernard Lerer, Biological Psychiatry Laboratory, Department of Psychiatry, Hadassah – Hebrew University Medical Center, Ein Karem, Jerusalem 91120, Israel. Tel: +972 2 6777185; Fax: +972 2 6439294; E-mail: lerer@cc.huji.ac.il

Received 17 November 2004; Revised 3 February 2005; Accepted 11 February 2005; Published online 6 April 2005.

Top

Abstract

We previously reported an autosomal scan for schizophrenia susceptibility loci in a systematically recruited sample of Arab Israeli families. The scan detected significant evidence for linkage at chromosome 6q23 with a nonparametric LOD score (NPL) of 4.60 (P=0.000004) and a multipoint parametric LOD score of 4.16. In order to refine this finding we typed 42 additional microsatellite markers on chromosome 6q between D6S1570 (99.01 cM from the pter) and D6S281 (190.14 from the pter) in the same sample (average intermarker distance approx1.7 cM). In the 23 cM region between D6S1715 and D6S311, markers were more closely spaced (approx1.1 cM). Multipoint nonparametric and parametric and single point linkage analyses were performed. The peak NPL rose to 4.98 (P=0.00000058) at D6S1626 (136.97 cM), immediately adjacent to D6S292 (NPL 4.98, P=0.00000068), the marker that gave the highest NPL in the original genome scan, under the broad diagnostic category. The putative susceptibility region (NPL-1) was reduced from 12.0 to 4.96 cM. The peak multipoint parametric LOD score was 4.63 at D6S1626 under a dominant genetic model, core diagnostic category and the LOD-1 interval was 2.10 cM. The maximum single point LOD score (3.55, theta=0.01) was also at D6S1626 (dominant model, core diagnostic category). Increased evidence for linkage in the same sample as in the original genome scan and consistent localization of the linkage peak add further support for the presence of a schizophrenia susceptibility locus at chromosome 6q23. Moreover, the markedly reduced linkage interval greatly improves prospects for identifying a schizophrenia susceptibility gene within the implicated region.

Keywords:

fine mapping, linkage, LOD score, schizophrenia, chromosome 6, microsatellite markers

Extra navigation

.
ADVERTISEMENT