Article

European Journal of Human Genetics (2005) 13, 731–741. doi:10.1038/sj.ejhg.5201402 Published online 30 March 2005

Mutational analysis of the TSC1 and TSC2 genes in a diagnostic setting: genotype – phenotype correlations and comparison of diagnostic DNA techniques in Tuberous Sclerosis Complex

Ozgur Sancak1, Mark Nellist1, Miriam Goedbloed1, Peter Elfferich1, Cokkie Wouters1, Anneke Maat-Kievit1, Bernard Zonnenberg3, Senno Verhoef2, Dicky Halley1 and Ans van den Ouweland1

  1. 1Department of Clinical Genetics, Erasmus Medical Center, Rotterdam, The Netherlands
  2. 2Family Cancer Clinic, Netherlands Cancer Institute, Amsterdam, The Netherlands
  3. 3TSC Clinic, Department of Medical Oncology, University Medical Center Utrecht, Utrecht, The Netherlands

Correspondence: Dr A van den Ouweland, Department of Clinical Genetics, Erasmus Medical Center, Dr Molewaterplein 50, 3015 GE Rotterdam, The Netherlands. Tel: +31 10 4087197; Fax: +31 10 4089489; E-mail: a.vandenouweland@erasmusmc.nl

Received 27 October 2004; Revised 4 February 2005; Accepted 8 February 2005; Published online 30 March 2005.

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Abstract

Tuberous sclerosis complex (TSC) is an autosomal dominant disorder characterised by the development of hamartomas in multiple organs and tissues. TSC is caused by mutations in either the TSC1 or TSC2 gene. We searched for mutations in both genes in a cohort of 490 patients diagnosed with or suspected of having TSC using a combination of denaturing gradient gel electrophoresis, single-strand conformational polymorphism, direct sequencing, fluorescent in situ hybridisation and Southern blotting. We identified pathogenic mutations in 362 patients, a mutation detection rate of 74%. Of these 362 patients, 276 had a definite clinical diagnosis of TSC and in these patients 235 mutations were identified, a mutation detection rate of 85%. The ratio of TSC2:TSC1 mutations was 3.4:1. In our cohort, both TSC1 mutations and mutations in familial TSC2 cases were associated with phenotypes less severe than de novo TSC2 mutations. Interestingly, consistent with other studies, the phenotypes of the patients in which no mutation was identified were, overall, less severe than those of patients with either a known TSC1 or TSC2 mutation.

Keywords:

TSC1 and TSC2, tuberous sclerosis complex, genotype–phenotype correlation

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