Article

European Journal of Human Genetics (2004) 12, 949–954. doi:10.1038/sj.ejhg.5201239 Published online 4 August 2004

Genome-wide association study identifies ITGB3 as a QTL for whole blood serotonin

Lauren A Weiss1,5, Jeremy Veenstra-VanderWeele2,5, Dina L Newman1,6, Soo-Jeong Kim2, Harvey Dytch1, Mary Sara McPeek1,3, Suzanne Cheng4, Carole Ober1, Edwin H Cook Jr2,1 and Mark Abney1

  1. 1Department of Human Genetics, The University of Chicago, Chicago, IL 60637, USA
  2. 2Department of Psychiatry, The University of Chicago, Chicago, IL 60637, USA
  3. 3Department of Statistics, The University of Chicago, Chicago, IL 60637, USA
  4. 4Roche Molecular Systems, Inc., Alameda, CA 94501, USA

Correspondence: Dr M Abney, 920 East 58th Street, Room 507E, Chicago, IL 60637, USA. Tel: +1 773 702 3388; Fax: +1 773 834 0505; E-mail: abney@uchicago.edu

5The first two authors contributed equally

6Current address: Department of Biological Sciences, Rochester Institute of Technology, Rochester 14623, NY, USA

Received 26 February 2004; Revised 28 April 2004; Accepted 5 May 2004; Published online 4 August 2004.

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Abstract

Serotonin has been implicated in common disorders involving the central nervous, gastrointestinal, cardiovascular, and pulmonary systems. We describe the first genome-wide screen to identify quantitative trait loci (QTLs) influencing whole blood serotonin in 567 members of a single large pedigree, using a novel association-based mapping approach. We identified an association between the beta3 integrin (ITGB3) Leu33Pro polymorphism on 17q21 and whole blood serotonin levels (P-value=9.8 times 10-5). This variant explained the evidence for linkage in this region when included as a covariate in the linkage analysis (change in LOD from 1.87 to 0.16), indicating that ITGB3 may be an important serotonin QTL.

Keywords:

genome-wide association, serotonin, integrin

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