Article
European Journal of Human Genetics (2004) 12, 949–954. doi:10.1038/sj.ejhg.5201239 Published online 4 August 2004
Genome-wide association study identifies ITGB3 as a QTL for whole blood serotonin
Lauren A Weiss1,5, Jeremy Veenstra-VanderWeele2,5, Dina L Newman1,6, Soo-Jeong Kim2, Harvey Dytch1, Mary Sara McPeek1,3, Suzanne Cheng4, Carole Ober1, Edwin H Cook Jr2,1 and Mark Abney1
- 1Department of Human Genetics, The University of Chicago, Chicago, IL 60637, USA
- 2Department of Psychiatry, The University of Chicago, Chicago, IL 60637, USA
- 3Department of Statistics, The University of Chicago, Chicago, IL 60637, USA
- 4Roche Molecular Systems, Inc., Alameda, CA 94501, USA
Correspondence: Dr M Abney, 920 East 58th Street, Room 507E, Chicago, IL 60637, USA. Tel: +1 773 702 3388; Fax: +1 773 834 0505; E-mail: abney@uchicago.edu
5The first two authors contributed equally
6Current address: Department of Biological Sciences, Rochester Institute of Technology, Rochester 14623, NY, USA
Received 26 February 2004; Revised 28 April 2004; Accepted 5 May 2004; Published online 4 August 2004.
Abstract
Serotonin has been implicated in common disorders involving the central nervous, gastrointestinal, cardiovascular, and pulmonary systems. We describe the first genome-wide screen to identify quantitative trait loci (QTLs) influencing whole blood serotonin in 567 members of a single large pedigree, using a novel association-based mapping approach. We identified an association between the
3 integrin (ITGB3) Leu33Pro polymorphism on 17q21 and whole blood serotonin levels (P-value=9.8
10-5). This variant explained the evidence for linkage in this region when included as a covariate in the linkage analysis (change in LOD from 1.87 to 0.16), indicating that ITGB3 may be an important serotonin QTL.
Keywords:
genome-wide association, serotonin, integrin
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