Original Article
Molecular Psychiatry (2007) 12, 367–375. doi:10.1038/sj.mp.4001916; published online 31 October 2006
Dense SNP association study for bipolar I disorder on chromosome 18p11 suggests two loci with excess paternal transmission
J G Mulle1, M D Fallin2, V K Lasseter3, J A McGrath3, P S Wolyniec3 and A E Pulver3
- 1McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA
- 2Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA
- 3Department of Psychiatry and Behavioral Sciences, Johns Hopkins School of Medicine, Baltimore, MD, USA
Correspondence: Dr AE Pulver, Department of Psychiatry and Behavioral Sciences, Johns Hopkins School of Medicine, 1820 Lancaster Street, Suite #300, Baltimore, MD 21231, USA. E-mail: aepulver@jhmi.edu
Received 30 August 2005; Revised 24 January 2006; Accepted 30 January 2006; Published online 31 October 2006.
Abstract
Parent-of-origin effects have been implicated as mediators of genetic susceptibility for a number of complex disease phenotypes, including bipolar disorder. Specifically, evidence for linkage on chromosome 18 is modified when allelic parent-of-origin is accommodated in the analysis. Our goal was to characterize the susceptibility locus for bipolar I disorder on chromosome 18p11 and investigate this parent-of-origin hypothesis in an association context. This was achieved by genotyping single nucleotide polymorphisms (SNPs) at a high density (1 SNP/5 kb) along 13.6 megabases of the linkage region. To increase our ability to detect a susceptibility locus, we restricted the phenotype definition to include only bipolar I probands. We also restricted our study population to Ashkenazi Jewish individuals; this population has characteristics of a genetic isolate and may therefore facilitate detection of variants for complex disease. Three hundred and forty-four pedigrees (363 parent/child trios) where probands were affected with bipolar 1 disorder were genotyped. Transmission disequilibrium test analysis revealed no statistically significant association to SNPs or haplotypes within this region in this sample. However, when parent-of-origin of transmitted SNPs was taken into account, suggestive association was revealed for two separate loci.
Keywords:
bipolar disorder, genetic association, 18p11, psychiatric genetics, parent of origin, transmission disequilibrium
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