Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Article
  • Published:

Charcot–Marie–Tooth type 1A duplication appears to arise from recombination at repeat sequences flanking the 1.5 Mb monomer unit

Abstract

We have constructed a 3.1 megabase (Mb) physical map of chromosome 17p11.2–p12, which contains a submicroscopic duplication in patients with Charcot–Marie–Tooth disease type 1A (CMT1A). We find that the CMT1A duplication is a tandem repeat of 1.5 Mb of DNA. A YAC contig encompassing the CMT1A duplication and spanning the endpoints was also developed. Several low copy repeats in 17p11.2–p12 were identified including the large (> 17 kb) CMT1A–REP unit which may be part of a mosaic repeat. CMT1A–REP flanks the 1.5 Mb CMT1A monomer unit on normal chromosome 17 and is present in an additional copy on the CMT1A duplicated chromosome. We propose that the de novo CMT1A duplication arises from unequal crossing over due to misalignment at these CMT1A–REP repeat sequences during meiosis.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Similar content being viewed by others

References

  1. Charcot, J.-M. & Marie, P. Sur une forme particulaiere d'atrophie musculaire progressive souvent familiale debutant par les pied et les jambes et atteignant plus tard les mains. Rev. Med. 6, 97–138 (1886).

    Google Scholar 

  2. Tooth, H.H. The Peroneal Type of Progressive Muscular Atrophy (H.K. Lewis, London, 1886).

    Google Scholar 

  3. Lupski, J.R., Garcia, C.A., Parry, G.J. & Patel, P.I. Charcot-Marie-Tooth Polyneuropathy Syndrome: Clinical Electrophysiological and Genetic Aspects. Current Neurology (ed. Appel, S.) 1–25 (Mosby-Yearbook, Chicago 1991).

    Google Scholar 

  4. Vance, J.M. Hereditary motor and sensory neuropathies. J. med. Genet. 28, 1–5 (1991).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Skre, H. Genetic and clinical aspects of Charcot-Marie-Tooth's disease. Clin. Genet. 6, 98–118 (1974).

    Article  CAS  PubMed  Google Scholar 

  6. Lupski, J.R. & Garcia, C.A. Molecular genetics and neuropathology of Charcot-Marie-Tooth disease type 1A. Brain Pathology 2, 337–349 (1992).

    Article  CAS  PubMed  Google Scholar 

  7. Lupski, J.R. et al. DNA duplication associated with Charcot-Marie-Tooth disease type 1A. Cell 66, 219–232 (1991).

    Article  CAS  PubMed  Google Scholar 

  8. Raeymaekers, P. et al. Duplication in chromosome 17p11.2 in Charcot-Marie-Tooth neuropathy type 1A (CMT 1A). Neuromusc. Dis. 1, 93–97 (1991).

    Article  CAS  PubMed  Google Scholar 

  9. Wright, E.C., Goldgar, D.E., Fain, P.R., Barker, D.F. & Skolnick, M.H. A genetic map of human chromosome 17p. Genomics 7, 103–109 (1990).

    Article  CAS  PubMed  Google Scholar 

  10. MacMillan, J.C., Upadhyaya, M. & Harper, P.S. Charcot-Marie-Tooth disease 1a(CMT1a): evidence for trisomy of the region p11.2 of chromosome 17 in South Wales families. J. med. Genet. 29, 12–13 (1992).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Hallam, P.J., Harding, A.E., Berciano, J., Barker, D.F. & Malcolm, S. Duplication of part of chromosome 17 is commonly associated with hereditary motor and sensory neuropathy type 1 (Charcot-Marie-Tooth disease type 1). Ann. Neurol. 31, 570–572 (1992).

    Article  CAS  PubMed  Google Scholar 

  12. Lupski, J.R., Pentao, L., Williams, L.L. & Patel, P.I. Stable inheritance of the CMT1A duplication in two patients with CMT1 and NF1. Am. J. med. Genet. (in the press).

  13. Hoogendijk, J.E. et al. De-novo mutation in hereditary motor and sensory neuropathy type 1. Lancet 339, 1081–1082 (1992).

    Article  CAS  PubMed  Google Scholar 

  14. Lupski, J.R. et al. Gene dosage is a mechanism for Charcot-Marie-Tooth disease type 1A. Nature Genet. 1, 29–33 (1992).

    Article  CAS  PubMed  Google Scholar 

  15. Suter, U. et al. Trembler mouse carries a point mutation in a myelin gene. Nature 356, 241–244 (1992).

    Article  CAS  PubMed  Google Scholar 

  16. Suter, U. et al. A leucine-to-proline mutation in the putative first transmembrane domain of the 22-kDa peripheral myelin protein in the trembler-J mouse. Proc. natn. Acad. Sci. U.S.A. 89, 4382–4386 (1992).

    Article  CAS  Google Scholar 

  17. Snipes, G.J., Suter, U., Welcher, A.A. & Shooter, E.M. Characterization of a novel peripheral nervous system myelin protein (PMP-22/SR13). J. cell Biol. 117, 225–238 (1992).

    Article  CAS  PubMed  Google Scholar 

  18. Low, P.A. & McLeod, J.G. Hereditary demyelinating neuropathy in the Trembler mouse. J. neurol. Sci. 26, 565–574 (1975).

    Article  CAS  PubMed  Google Scholar 

  19. Low, P.A. Hereditary hypertrophic neuropathy in the Trembler mouse. Part 1. Histopathological studies: Light microscope. J. neurol. Sci. 30, 327–341 (1976).

    Article  CAS  PubMed  Google Scholar 

  20. Low, P.A. Hereditary hypertrophic neuropathy in the Trembler mouse. Part 2. Histopathological studies: Electron microscope. J. neurol. Sci. 30, 343–368 (1976).

    Article  CAS  PubMed  Google Scholar 

  21. Low, P.A. The evolution of ‘onion bulbs’ in the hereditary hypertrophic neuropathy of the Trembler mouse. Neuropathol. app. Neurobiol. 3, 81–92 (1977).

    Article  Google Scholar 

  22. Low, P.A., McLeod, J.G. & Prineas, J.W. Hypertrophic Charcot-Marie-Tooth disease. Light and electron microscope studies of the sural nerve. J. neurol. Sci. 35, 93–115 (1978).

    Article  CAS  PubMed  Google Scholar 

  23. Low, P.A. & McLeod, J.G. Refractory period, conduction of trains of impulses, and effect of temperature on conduction in chronic hypertrophic neuropathy. J. neurol. Neurosurg. Psych. 40, 434–447 (1977).

    Article  CAS  Google Scholar 

  24. Patel, P.I. et al. The gene for the peripheral myelin protein PMP-22 is a candidate for Charcot-Marie-Tooth disease type 1A. Nature Genet. 1, 159–165 (1992).

    Article  CAS  PubMed  Google Scholar 

  25. Valentijn, L.J. et al. The peripheral myelin gene PMP-22/GAS-3 is duplicated in Charcot-Marie-Tooth disease type 1A. Nature Genet. 1, 166–170 (1992).

    Article  CAS  PubMed  Google Scholar 

  26. Timmerman, V. et al. The peripheral myelin protein gene PMP-22 is contained within the Charcot-Marie-Tooth disease type 1A duplication. Nature Genet. 1, 171–175 (1992).

    Article  CAS  PubMed  Google Scholar 

  27. Matsunami, N. et al. Peripheral myelin protein-22 gene maps in the duplication in chromosome 17p11.2 associated with Charcot-Marie-Tooth 1A. Nature Genet. 1, 176–179 (1992).

    Article  CAS  PubMed  Google Scholar 

  28. Burke, D.T., Carle, G.F. & Olson, M.V. Cloning of large segments of exogenous DNA into yeast by means of artificial chromosome vectors. Science 236, 806–812 (1987).

    Article  CAS  PubMed  Google Scholar 

  29. Brownstein, B.H. et al. Isolation of single-copy human genes from a library of yeast artificial chromosome clones. Science 244, 1348–1351 (1989).

    Article  CAS  PubMed  Google Scholar 

  30. Albertsen, H.M. et al. Construction and characterization of a yeast artificial chromosome library containing seven haploid human genome equivalents. Proc. natn. Acad. Sci. U.S.A. 87, 4256–4260 (1990).

    Article  CAS  Google Scholar 

  31. Guzzetta, V. et al. Somatic cell hybrids, sequence tagged sites, simple repeat polymorphisms and yeast artificial chromosomes for physical and genetic mapping of proximal 17p. Genomics 13, 551–559 (1992).

    Article  CAS  PubMed  Google Scholar 

  32. Weber, J.L. et al. Dinucleotide repeat polymorphisms at the D17S250 and D17S261 loci. Nucl. Acids Res. 18, 4640 (1990).

    PubMed  PubMed Central  Google Scholar 

  33. Raeymaekers, P. et al. Estimation of the size of the chromosome 17p11.2 duplication Charcot-Marie-Tooth neuropathy type 1a (CMT1a). J. med. Genet. 29, 5–11 (1992).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  34. Patel, P.I. et al. Isolation of a marker linked to the Charcot-Marie-Tooth disease type 1A gene by differential Alu-PCR of human chromosome 17-retaining hybrids. Am. J. hum. Genet. 47, 926–934 (1990).

    CAS  PubMed  PubMed Central  Google Scholar 

  35. Greenberg, F. et al. Molecular analysis of the Smith-Magenis syndrome: a possible contiguous gene syndrome associated with del(17)(p11.2). Am. J. hum. Genet. 49, 1207–1218 (1991).

    CAS  PubMed  PubMed Central  Google Scholar 

  36. van Tuinen, P., Rich, D.C., Summers, K.M. & Ledbetter, D.H. Regional mapping panel for human chromosome 17: Application to neurofibromatosis type 1. Genomics 1, 374–381 (1987).

    Article  CAS  PubMed  Google Scholar 

  37. Patel, P.I. et al. Genetic mapping of autosomal dominant Charcot-Marie-Tooth disease in a large French-Acadian kindred: Identification of new linked markers on chromosome 17. Am. J. hum. Genet. 46, 801–809 (1990).

    CAS  PubMed  PubMed Central  Google Scholar 

  38. Bird, A. CpG islands as gene markers in the vertebrate nucleus. Trends Genet. 3, 341–347 (1987).

    Article  Google Scholar 

  39. Hu, X. & Worton, R.G. Partial gene duplication as a cause of human disease. Hum. Mut. 1, 3–12 (1992).

    Article  CAS  PubMed  Google Scholar 

  40. Yen, P.H. et al. Frequent deletions of the human X chromosome distal short arm result from recombination between low copy repetitive elements. Cell 61, 603–610 (1990).

    Article  CAS  PubMed  Google Scholar 

  41. Ballabio, A., Bardoni, B., Guioli, S., Basler, E. & Camerino, G. Two families of low-copy-number repeats are interspersed on Xp22.3: implications for the high frequency of deletions in this region. Genomics 6, 263–270 (1990).

    Article  Google Scholar 

  42. Vollrath, D., Nathans, J. & Davis, R.W. Tandem array of human visual pigment genes at Xq28. Science 240, 1669–1672 (1988).

    Article  CAS  PubMed  Google Scholar 

  43. Nathans, J. et al. Molecular genetics of human blue cone monochromacy. Science 245, 831–838 (1989).

    Article  CAS  PubMed  Google Scholar 

  44. Lupski, J.R., Garcia, C.A., Zoghbi, H.Y., Hoffman, E.P. & Fenwick, R.G. Discordance of muscular dystrophy in monozygotic female twins: Evidence supporting asymmetric splitting of the inner cell mass in a manifesting carrier of Duchenne dystrophy. Am. J. med. Genet. 40, 354–364 (1991).

    Article  CAS  PubMed  Google Scholar 

  45. Hu, X., Ray, P.N., Murphy, E.G., Thompson, M.W. & Worton, R.G. Duplicational mutation at the Duchenne muscular dystrophy locus: Its frequency, distribution, origin, and phenotype genotype correlation. Am. J. hum. Genet. 46, 682–695 (1990).

    CAS  PubMed  PubMed Central  Google Scholar 

  46. Darras, B.T. et al. Intragenic deletions in 21 Duchenne muscular dystrophy (BMD)/Becker muscular dystrophy (BMD) families studied with dystrophin cDNA: location of breakpoints on HindIII and BglII exon-containing fragment maps, meiotic and mitotic origin of the mutations. Am. J. hum. Genet. 43, 620–629 (1988).

    CAS  PubMed  PubMed Central  Google Scholar 

  47. Kwiatkowski, T.J. Jr., Zoghbi, H.Y., Ledbetter, S.A., Ellison, K.A. & Chinault, A.C. Rapid identification of yeast artificial chromosome clones by matrix pooling and crude lysate PCR. Nucl. Acids Res. 18, 7191 (1990).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  48. Nelson, D.L. et al. Alu polymerase chain reaction: A method for rapid isolation of human-specific sequences from complex DNA sources. Proc. natn. Acad. Sci. U.S.A 86, 6686–6690 (1989).

    Article  CAS  Google Scholar 

  49. Riley, J. et al. A novel, rapid method for the isolation of terminal sequences from yeast artificial chromosome (YAC) clones. Nucl. Acids Res. 18, 2887–2890 (1990).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  50. Edwards, A., Civitello, A., Hammond, H.A. & Caskey, C.T. DNA typing and genetic mapping with trimeric and tetrameric tandem repeats. Am. J. hum. Genet. 49, 746–756 (1991).

    CAS  PubMed  PubMed Central  Google Scholar 

  51. Breukel, C. et al. Vector-Alu PCR: a rapid step in mapping cosmids and YACs. Nucl. Acids Res. 18, 3097 (1990).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  52. Burmeister, M. et al. A map of the distal region of the long arm of human chromosome 21 constructed by radiation hybrid mapping and pulsed-field gel electrophoresis. Genomics 9, 19–30 (1991).

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Pentao, L., Wise, C., Chinault, A. et al. Charcot–Marie–Tooth type 1A duplication appears to arise from recombination at repeat sequences flanking the 1.5 Mb monomer unit. Nat Genet 2, 292–300 (1992). https://doi.org/10.1038/ng1292-292

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1038/ng1292-292

This article is cited by

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing