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Serum proteomics profiling—a young technology begins to mature

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References

  1. Petricoin, E.F. et al. Lancet 359, 572–577 (2002).

    Article  CAS  Google Scholar 

  2. Sorace, J.M. & Zhan, M. BMC Bioinformatics 4, 24 (2004).

    Article  Google Scholar 

  3. Baggerly, K.A., et al. Bioinformatics 20, 777–785 (2004).

    Article  CAS  Google Scholar 

  4. Baggerly, K.A., et al. Signal in noise: evaluating reported reproducibility of serum proteomics tests for ovariancancer. J. Natl. Cancer Inst., 97, in press (2005).

  5. Vlahou, A. et al. Clin. Chem. 50, 1438–1441 (2004).

    Article  CAS  Google Scholar 

  6. Pusztai, L. et al. Cancer 100, 1814–1822 (2004).

    Article  CAS  Google Scholar 

  7. Lin, Z., Jenson, S.D., Lim, M.S. & Elenitoba-Johnson, K.S. Mod. Pathol. 17, 670–678 (2004).

    Article  CAS  Google Scholar 

  8. Zhang, Z. et al. Cancer Res. 64, 5882–5890 (2004).

    Article  CAS  Google Scholar 

  9. Wadsworth, J.T. et al. Clin. Cancer Res. 10, 1625–1632 (2004).

    Article  CAS  Google Scholar 

  10. Soltys, S.G. et al. Clin. Cancer Res. 10, 4806–4812 (2004).

    Article  CAS  Google Scholar 

  11. Xiao, Z. et al. Cancer Res. 64, 2904–2909 (2004).

    Article  CAS  Google Scholar 

  12. Diamandis, E.P. Expert Rev. Mol. Diagn. 4, 575–577 (2004).

    Article  Google Scholar 

  13. Diamandis, E.P. Mol. Cell Proteomics 3, 367–378 (2004).

    Article  CAS  Google Scholar 

  14. Rogers, M.A. et al. Cancer Res. 63, 6971–6983 (2003).

    CAS  PubMed  Google Scholar 

  15. Hu, J., et al. Brief. Funct. Genomic. Proteomic. 3, 322–331 (2005).

    Article  CAS  Google Scholar 

  16. Baggerly, K.A., et al. Endocr. Relat. Cancer 11, 583–584 (2004).

    Article  CAS  Google Scholar 

  17. Villanueva, J. et al. Anal. Chem. 76, 1560–1570 (2004).

    Article  CAS  Google Scholar 

  18. Koomen, J.M. et al. Rapid Commun. Mass Spectrom. 18, 2537–1848 (2004).

    Article  CAS  Google Scholar 

  19. Johnson, K.L., et al. Anal. Chem. 76, 5097–5103 (2004).

    Article  CAS  Google Scholar 

  20. Grizzle, W.E. et al. Dis. Markers 19, 185–195 (2004).

    Article  Google Scholar 

  21. Semmes, O.J. et al. Clin. Chem. 51, 102–112 (2005).

    Article  CAS  Google Scholar 

  22. Ransohoff, D.F. Nat. Rev. Cancer 4, 309–314 (2004).

    Article  CAS  Google Scholar 

  23. Petricoin, E.F. 3rd et al. J. Natl. Cancer Inst. 94, 1576–1578 (2002).

    Article  CAS  Google Scholar 

  24. Conrads, T.P. et al. Endocr. Relat. Cancer 11, 163–178 (2004).

    Article  CAS  Google Scholar 

  25. Fung, E.T. & Enderwick, C. Biotechniques Suppl, 34–41 (2002).

  26. Yasui, Y. et al. J. Biomed. Biotechnol. 2003, 242–248 (2003).

    Article  Google Scholar 

  27. Yasui, Y. et al. Biostatistics 4, 449–463 (2003).

    Article  Google Scholar 

  28. Coombes, K.R. et al. Clin. Chem. 49, 1615–1623 (2003).

    Article  CAS  Google Scholar 

  29. Qu, Y. et al. Biometrics 59, 143–151 (2003).

    Article  Google Scholar 

  30. Coombes, K.R. et al. Improved peak detection and quantification of mass spectrometry data acquired from surface-enhanced laser desorption and ionization by denoising spectra with the undecimated discrete wavelet transform. Proteomics, in press (2005).

  31. Morris, J.S., Coombes, K.R., Koomen, J., Baggerly, K.A. & Kobayashi, R. Bioinformatics, published online 26 January 2005.

  32. Coombes, K.R., et al. Understanding the characteristics of mass spectrometry data through the use of simulation. Cancer Informatics, in press.

  33. Sauve, A.C. & Speed, T.P. Normalization, baseline correction and alignment of high-throughput mass spectrometry data Proceedings Gensips 2004, in press (2005).

  34. Malyarenko, D.I. et al. Clin. Chem. 51, 65–74 (2005).

    Article  CAS  Google Scholar 

Download references

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Coombes, K., Morris, J., Hu, J. et al. Serum proteomics profiling—a young technology begins to mature. Nat Biotechnol 23, 291–292 (2005). https://doi.org/10.1038/nbt0305-291

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