Letters to Nature

Nature 427, 652-656 (12 February 2004) | doi:10.1038/nature02306; Received 16 August 2003; Accepted 19 December 2003

Structural basis for removal of adenine mispaired with 8-oxoguanine by MutY adenine DNA glycosylase

J. Christopher Fromme1, Anirban Banerjee2, Susan J. Huang1 and Gregory L. Verdine1,2

  1. Department of Molecular and Cellular Biology, Harvard University, Cambridge, Massachusetts 02138, USA
  2. Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, USA

Correspondence to: Gregory L. Verdine1,2 Email: verdine@chemistry.harvard.edu
Atomic coordinates have been deposited in the Protein Data Bank under accession numbers 1RRQ, 1RRS and 1RRT.

The genomes of aerobic organisms suffer chronic oxidation of guanine to the genotoxic product 8-oxoguanine (oxoG)1. Replicative DNA polymerases misread oxoG residues and insert adenine instead of cytosine opposite the oxidized base. Both bases in the resulting AdotoxoG mispair are mutagenic lesions, and both must undergo base-specific replacement to restore the original CdotG pair. Doing so represents a formidable challenge to the DNA repair machinery, because adenine makes up roughly 25% of the bases in most genomes. The evolutionarily conserved enzyme adenine DNA glycosylase (called MutY in bacteria and hMYH in humans) initiates repair of AdotoxoG to CdotG by removing the inappropriately paired adenine base from the DNA backbone. A central issue concerning MutY function is the mechanism by which AdotoxoG mispairs are targeted among the vast excess of AdotT pairs. Here we report the use of disulphide crosslinking2 to obtain high-resolution crystal structures of MutY–DNA lesion-recognition complexes. These structures reveal the basis for recognizing both lesions in the AdotoxoG pair and for catalysing removal of the adenine base.

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