Abstract
A detailed NMR description of the compact unfolded state of an unstable protein reveals the existence of native and non-native structure under non-denaturing conditions. The structural characterization of this and similar species may provide clues about protein folding mechanisms.
This is a preview of subscription content, access via your institution
Access options
Subscribe to this journal
Receive 12 print issues and online access
$189.00 per year
only $15.75 per issue
Buy this article
- Purchase on Springer Link
- Instant access to full article PDF
Prices may be subject to local taxes which are calculated during checkout
References
Privalov, P.L. & Khechinashvili, N.N. J. Mol. Biol. 86, 665–684 (1974).
Anson, M.L. & Mirsky, A.E. J. Gen. Physiol. 17, 393–398 (1934).
Tanford, C. Adv. Protein Chem. 23, 121–282 (1968).
Dill, K.A. Biochemistry 29, 7133–7155 (1990).
Neri, D., Billeter, M., Wider, G. & Wüthrich, K. Science 257, 1559–1563 (1992).
Muchmore, S.W. et al. Nature 381, 335–341 (1996).
Gast, K. et al. Biochemistry 34, 13211–1328 (1995).
Kriwacki, R.W., Hengst, L., Tennant, L., Reed, S.I. & Wright, P.E. Proc. Natl. Acad. Sci. USA 93, 11504–11509 (1996).
Weinreb, P.H., Zhen, W., Poon, A.W., Conway, K.A. & Lansbury, P.T. Jr., Biochemistry 35, 13709–13715 (1996).
Daughdrill, G.W., Chadsey, M.S., Karlinsey, J.E., Hughes, K.T. & Dahlquist, F.W. Nature Struct. Biol. 4, 285–291 (1997).
Daughdrill, G.W., Hanely, L.J. & Dahlquist, F.W. Biochemistry 37, 1076–1082 (1998).
Lydakis-Simantiris, N., Hutchison, R.S., Betts, S.D., Barry, B.A. & Yocum, C.F. Biochemistry 38, 404–414 (1999).
Dill, K.A. & Shortle, D. Annu. Rev. Biochem. 60, 795–825 (1991).
Lattman, E.E., Fiebig, K.M. & Dill, K.A. Biochemistry 33, 6158–6166 (1994).
Shortle, D.R. Curr. Opin. Struct. Biol. 6, 24–30 (1996).
Dyson, H.J. & Wright, P.E. Nature Struct. Biol. NMR Suppl. 5, 499–503 (1998).
Gillespie, J.R. & Shortle, D. J. Mol. Biol. 268, 158–169 (1997).
Gillespie, J.R. & Shortle, D. J. Mol. Biol. 268, 170–184 (1997).
Mok, Y.-K., Kay, C.M., Kay, L.E. & Forman-Kay, J. J. Mol. Biol. 289, 619–638 (1999).
Olivier, J.P. et al. Cell 73, 179–191 (1993).
Zhang, O. & Forman-Kay, J.D. Biochemistry 34, 6784–6794 (1995).
Musacchio, A., Noble, M., Pauptit, R., Wierenga, R. & Saraste, M. Nature 359, 851–855 (1992).
LeMaster, D.M. Q. Rev. Biophys. 23, 133–174 (1990).
LeMaster, D.M. Annu. Rev. Biophys. Biophys. Chem. 19, 243–266 (1990).
Gardner, K.H., Rosen, M.K. & Kay, L.E. Biochemistry 36, 1389–1401 (1997).
Briercheck, D.M. & Rule, G.S. J. Magn. Reson. 134, 52–56 (1998).
Mal, T.K., Matthews, S.J., Kovacs, H., Campbell, I.D. & Boyd, J. J. Biomol. NMR 12, 259–276 (1998).
Ishima, R., Louis, J.M. & Torchia, D.A. J. Magn. Reson. 137, 289–292 (1999).
Oshiro, C.M., Thomason, J. & Kuntz, I.D. Biopolymers 31, 1049–1064 (1991).
Zitzewitz, J.A. & Matthews, C.R. Biochemistry, in the press (1999).
Raabe, T. et al. EMBO J. 14, 2509–2518 (1995).
Chardin, P., Cussac, D., Maignan, S. & Ducruix, A. FEBS Lett. 369, 47–51 (1995).
Maignan, S. et al. Science 268, 291–293 (1995).
Engen, J.R., Smithgall, T.E., Gmeiner, W.H. & Smith, D.L. J. Mol. Biol. 287, 645–656 (1999).
Xu, R., Ayers, B., Cowburn, D. & Muir, T.W. Proc. Natl. Acad. Sci. USA 96, 388–393 (1999).
Rose, G.D. Nature Struct. Biol. 4, 512–514 (1997).
Rose, G.D., Gierasch, L.M. & Smith, J.A. Adv. Protein Chem. 37, 1–109 (1985).
Bystroff, C. & Baker, D. J. Mol. Biol. 281, 565–577 (1998).
Dyson, H.J. et al. Eur. J. Biochem. 255, 462–471 (1998).
Grantcharova, V.P., Riddle, D.S., Santiago, J.V. & Baker, D. Nature Struct. Biol. 5, 714–720 (1998).
Yi, Q., Bystroff, C., Rajagopal, P., Klevit, R.E. & Baker, D. J. Mol. Biol. 283, 293–300 (1998).
Wrable, J.O. & Shortle, D. Protein Sci. 5, 2343–2352 (1996).
Prieto, J., Wilmans, M., Jimenez, M.A., Rico, M. & Serrano, L. J. Mol. Biol. 268, 760–778 (1997).
Martinez, J.C., Pisabarro, M.T. & Serrano, L. Nature Struct. Biol. 5, 721–729 (1998).
Hammond, G.S. J. Am. Chem. Soc. 77, 334–338 (1955).
Schwalbe, H. et al. Biochemistry 36, 8977–8991 (1997).
Hennig, M. et al. J. Mol. Biol. 288, 705–723 (1999).
Zhang, O. & Forman-Kay, J.D. Biochemistry 36, 3959–3970 (1997).
Jacob, M. et al. Biochemistry 38, 2882–2891 (1999).
Bilsel, O.S. & Matthews, C.R. Adv. Protein Chem. in preparation (1999).
Karplus, M. & Weaver, D.L. Protein Sci. 3, 650–668 (1994).
Baldwin, R.L. & Rose, G.D. Trends Biochem. Sci. 24, 26–33 (1999).
Baldwin, R.L. & Rose, G.D. Trends Biochem. Sci. 24, 77–83 (1999).
Viguera, A.R., Martinez, J.C., Filimonov, V.V., Mateo, P.L. & Serrano, L. Biochemistry 33, 2142–2150 (1994).
Plaxco, K.W. et al. Biochemistry 37, 2529–2537 (1998).
Guijarro, J.I., Morton, C.J., Plaxco, K.W., Campbell, I.D. & Dobson, C.M. J. Mol. Biol. 276, 657–667 (1998).
Sosnick, T.R., Shtilerman, M.D., Mayne, L. & Englander, S.W. Proc. Natl. Acad. Sci. USA 94, 8545–8550 (1997).
Qi, P.X., Sosnick, T.R. & Englander, S.W. Nature Struct. Biol. 5, 882–884 (1998).
Noppert, A., Gast, K., Zirwer, D. & Damaschun, G. Folding Design 3, 213–221 (1998).
Shastry, M.C. & Roder, H. Nature Struct. Biol. 5, 385–392 (1998).
Jennings, P.A. Nature Struct. Biol. 5, 846–848 (1998).
Plaxco, K.W., Simons, K.T. & Baker, D. J. Mol. Biol. 277, 985–994 (1998).
Jackson, S.E. Folding Design 3, R81–R91 (1998).
Burns, L.L., Dalessio, P.M. & Ropson, I.J. Proteins 33, 107–118 (1998).
Ferguson, N., Capaldi, A.P., James, R., Kleanthous, C. & Radford, S.E. J. Mol. Biol. 286, 1597–1608 (1999).
Laurents, D.V. & Baldwin, R.L. Biophys. J. 75, 428–434 (1998).
Alm, E. & Baker, D. Curr. Opin. Struct. Biol. 9, 189–196 (1999).
Wittekind, M. et al. Biochemistry 33, 13531–13539 (1994).
Kraulis, P.J. J. Appl. Crystallogr. 24, 946–950 (1991).
Acknowledgements
The insights of O. Bilsel, C.R. Matthews, V. Smith, and J. Zitzewitz are gratefully acknowledged.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Lecomte, J., Falzone, C. Where U and I meet. Nat Struct Mol Biol 6, 605–608 (1999). https://doi.org/10.1038/10643
Issue Date:
DOI: https://doi.org/10.1038/10643
This article is cited by
-
Structural correspondence between the α-helix and the random-flight chain resolves how unfolded proteins can have native-like properties
Nature Structural & Molecular Biology (2003)
-
Stepwise formation of α-helices during cytochrome c folding
Nature Structural Biology (2000)