TABLE 2
FROM:
Salt-responsive genes in rice revealed by cDNA microarray analysis
Dai Yin CHAO, Yong Hai LUO, Min SHI, Da LUO and Hong Xuan LIN
BACK TO ARTICLETable 2. Categories of transcripts significantly regulated in salt-stressed Nona
| Functional categories | Group Ia | Group IIb | Group IIIc | Group IVd | Group Ve | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Nof | (%)g | %h | No | (%) | % | No | (%) | % | No | (%) | % | No | (%) | % | Total | |
| Unknown or Unclassified | 10 | 35.71 | 7.75 | 82 | 29.50 | 63.57 | 13 | 23.21 | 10.08 | 7 | 12.28 | 5.43 | 17 | 25.37 | 13.18 | 129 |
| Metabolism | 1 | 3.57 | 0.85 | 65 | 23.38 | 55.08 | 8 | 14.29 | 6.78 | 20 | 35.09 | 16.95 | 24 | 35.82 | 20.34 | 118 |
| Kinase | 5 | 17.86 | 15.63 | 17 | 6.12 | 53.13 | 3 | 5.36 | 9.38 | 3 | 5.26 | 9.38 | 4 | 5.97 | 12.50 | 32 |
| Transcription | 8 | 28.57 | 25.00 | 18 | 6.47 | 56.25 | 4 | 7.14 | 12.50 | 0 | 0.00 | 0.00 | 2 | 2.99 | 6.25 | 32 |
| Signal transduction | 1 | 3.57 | 4.35 | 14 | 5.04 | 60.87 | 3 | 5.36 | 13.04 | 2 | 3.51 | 8.70 | 3 | 4.48 | 13.04 | 23 |
| Cell defense or antioxditant | 1 | 3.57 | 1.96 | 37 | 13.31 | 72.55 | 7 | 12.50 | 13.73 | 1 | 1.75 | 1.96 | 5 | 7.46 | 9.80 | 51 |
| Cellular transport | 0 | 0.00 | 0.00 | 17 | 6.12 | 60.71 | 2 | 3.57 | 7.14 | 6 | 10.53 | 21.43 | 3 | 4.48 | 10.71 | 28 |
| No hits | 1 | 3.57 | 5.00 | 9 | 3.24 | 45.00 | 5 | 8.93 | 25.00 | 3 | 5.26 | 15.00 | 2 | 2.99 | 10.00 | 20 |
| Photosynthesis | 0 | 0.00 | 0.00 | 0 | 0.00 | 0.00 | 1 | 1.79 | 20.00 | 3 | 5.26 | 60.00 | 1 | 1.49 | 20.00 | 5 |
| RNA process | 0 | 0.00 | 0.00 | 1 | 0.36 | 11.11 | 5 | 8.93 | 55.56 | 3 | 5.26 | 33.33 | 0 | 0.00 | 0.00 | 9 |
| Other | 1 | 3.57 | 2.56 | 18 | 6.47 | 46.15 | 5 | 8.93 | 12.82 | 9 | 15.79 | 23.08 | 6 | 8.96 | 15.38 | 39 |
| Total | 28 | 100 | 5.76 | 278 | 100 | 57.20 | 56 | 100 | 11.52 | 57 | 100 | 11.73 | 67 | 100 | 13.79 | 486 |
a–e Early transient response ESTs, intermediate unregulated ESTs, long term unregulated ESTs, intermediate downregulated ESTs and long term down regulated ESTs.
f Number of ESTs.
g Percentage of the Group.
h Percentage of the total functional category.
The bold numbers are the data referred in text
