Review
Cell Death and Differentiation (2009) 16, 1093–1107; doi:10.1038/cdd.2009.44; published online 17 April 2009
Guidelines for the use and interpretation of assays for monitoring cell death in higher eukaryotes
Edited by G Melino
L Galluzzi1,2,3, S A Aaronson4, J Abrams5, E S Alnemri6, D W Andrews7, E H Baehrecke8, N G Bazan9, M V Blagosklonny10, K Blomgren11,12, C Borner13, D E Bredesen14,15, C Brenner16,17, M Castedo1,2,3, J A Cidlowski18, A Ciechanover19, G M Cohen20, V De Laurenzi21, R De Maria22,23, M Deshmukh24, B D Dynlacht25, W S El-Deiry26, R A Flavell27,28, S Fulda29, C Garrido30,31, P Golstein32,33,34, M-L Gougeon35, D R Green36, H Gronemeyer37,38,39, G Hajnóczky40, J M Hardwick41, M O Hengartner42, H Ichijo43, M Jäättelä44, O Kepp1,2,3, A Kimchi45, D J Klionsky46, R A Knight47, S Kornbluth48, S Kumar49, B Levine28,50, S A Lipton51,52,53,54, E Lugli55, F Madeo56, W Malorni57, J-CW Marine58,59, S J Martin60, J P Medema61,62, P Mehlen63,64,65, G Melino20,66, U M Moll67,68,69, E Morselli1,2,3, S Nagata70, D W Nicholson71, P Nicotera20, G Nuñez72, M Oren73, J Penninger74, S Pervaiz75,76,77, M E Peter78, M Piacentini79,80, J H M Prehn81, H Puthalakath82, G A Rabinovich83, R Rizzuto84, C M P Rodrigues85, D C Rubinsztein86, T Rudel87, L Scorrano88,89, H-U Simon90, H Steller28,91, J Tschopp92, Y Tsujimoto93, P Vandenabeele59,94, I Vitale1,2,3, K H Vousden95, R J Youle96, J Yuan97, B Zhivotovsky98 and G Kroemer1,2,3
- 1INSERM, U848, F-94805 Villejuif, France
- 2Institut Gustave Roussy, F-94805 Villejuif, France
- 3Université Paris Sud-XI, F-94805 Villejuif, France
- 4Department of Oncological Sciences, Mount Sinai School of Medicine, New York, NY 10029, USA
- 5Department of Cell Biology, UT Southwestern Medical Center, Dallas, TX 75390, USA
- 6Department of Biochemistry and Molecular Biology, Center for Apoptosis Research, Kimmel Cancer Institute, Thomas Jefferson University, Philadelphia, PA 19107-5587, USA
- 7Department of Biochemistry and Biomedical Sciences, McMaster University, L8N 3Z5 Hamilton, Canada
- 8Department of Cancer Biology, University of Massachusetts Medical School, Worcester, MA 01605-2324, USA
- 9Neuroscience Center of Excellence, School of Medicine, Louisiana State University Health Sciences Center, New Orleans, LA 70112, USA
- 10Roswell Park Cancer Institute, Buffalo, NY 14263, USA
- 11Center for Brain Repair and Rehabilitation, Institute of Neuroscience and Physiology, University of Gothenburg, SE-405 30 Gothenburg, Sweden
- 12Department of Pediatric Oncology, The Queen Silvia Children's Hospital, SE-416 85 Gothenburg, Sweden
- 13Institute of Molecular Medicine and Cell Research (ZBMZ), Albert-Ludwigs-Universität Freiburg, 79104 Freiburg, Germany
- 14Buck Institute for Age Research, Novato, CA 94945, USA
- 15University of California – San Francisco, San Francisco, CA 94143, USA
- 16University of Versailles/St Quentin, 78035 Versailles, France
- 17CNRS, UMR8159, 78035 Versailles, France
- 18National Institutes of Environmental Health Sciences, NIH, Duhram, NC 27709, USA
- 19Vascular and Tumor Biology Research Center, The Rappaport Faculty of Medicine, Technion – Israel Institute of Technology, 31096 Haifa, Israel
- 20Medical Research Council, Toxicology Unit, Leicester University, Leicester LE1 9HN, UK
- 21Dipartimento di Scienze Biomediche, Università 'G. d'Annunzio' Chieti-Pescara, 66100 Chieti, Italy
- 22Department of Hematology, Oncology and Molecular Medicine, Istituto Superiore di Sanità, 00161 Rome, Italy
- 23Mediterranean Institute of Oncology, 95030 Catania, Italy
- 24Neuroscience Center, Department of Cell and Developmental Biology, University of North Carolina, Chapel Hill, NC 27599-7250, USA
- 25Department of Pathology, New York University School of Medicine, New York, NY 10016, USA
- 26Hematology-Oncology Division, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA
- 27Department of Immunobiology, Yale University School of Medicine, New Haven, CT 06520, USA
- 28Howard Hughes Medical Institute, Chevy Chase, MD 20815-6789, USA
- 29University Children's Hospital, 89075 Ulm, Germany
- 30INSERM, UMR866, 21049 Dijon, France
- 31Faculty of Medicine and Pharmacy, University of Burgundy, 21049 Dijon, France
- 32INSERM, U631, 13288 Marseille, France
- 33CNRS, UMR6102, 13288 Marseille, France
- 34Centre d'Immunologie de Marseille-Luminy, Aix Marseille Université, 13288 Marseille, France
- 35Institut Pasteur, Antiviral Immunity, Biotherapy and Vaccine Unit, 75015 Paris, France
- 36Department of Immunology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA
- 37Department of Cancer Biology – Institut de Génétique et de Biologie Moléculaire et Cellulaire, 67404 Illkirch, France
- 38CNRS, UMR7104, 67404 Illkirch, France
- 39INSERM, U964, 67404 Illkirch, France
- 40Department of Pathology, Anatomy and Cell Biology, Thomas Jefferson University, Philadelphia, PA 19107, USA
- 41Department of Pharmacology and Molecular Sciences, Johns Hopkins University, Baltimore, MD 21205, USA
- 42Institute of Molecular Biology, University of Zurich, 8057 Zurich, Switzerland
- 43Graduate School of Pharmaceutical Sciences, University of Tokyo, Tokyo 113-0033, Japan
- 44Danish Cancer Society, Department of Apoptosis, Institute of Cancer Biology, DK-2100 Copenhagen, Denmark
- 45Department of Molecular Genetics, Weizmann Institute of Science, 76100 Rehovot, Israel
- 46Life Sciences Institute and Department of Molecular, Cellular, and Developmental Biology and Biological Chemistry, University of Michigan, Ann Arbor, MI 48109, USA
- 47Institute of Child Health, University College London, London WC1N 1EH, UK
- 48Duke University School of Medicine, Durham, NC 27710, USA
- 49Centre for Cancer Biology, Hanson Institute, Adelaide, South Australia 5000, Australia
- 50Southwestern Medical Center, University of Texas, Dallas, TX 75390, USA
- 51Burnham Institute for Medical Research, La Jolla, CA 92037, USA
- 52The Salk Institute for Biological Studies, La Jolla, CA 92037, USA
- 53The Scripps Research Institute, La Jolla, CA 92037, USA
- 54Univerisity of California-San Diego, La Jolla, CA 92093, USA
- 55Immunotechnology Section, Vaccine Research Center, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, MD 20892, USA
- 56Institute of Molecular Biosciences, University of Graz, 8010 Graz, Austria
- 57Department of Therapeutic Research and Medicines Evaluation, Section of Cell Aging and Degeneration, Istituto Superiore di Sanità, 00161 Rome, Italy
- 58Laboratory for Molecular Cancer Biology, VIB, 9052 Ghent, Belgium
- 59Department for Molecular Biology, Ghent University, 9052 Ghent, Belgium
- 60Department of Genetics, Trinity College, Dublin 2, Ireland
- 61Center for Experimental and Molecular Medicine, Academic Medical Center, 1105 AZ Amsterdam, The Netherlands
- 62University of Amsterdam, 1012 ZA Amsterdam, The Netherlands
- 63Apoptosis, Cancer, and Development Laboratory, Centre Léon Berard, 69008 Lyon, France
- 64CNRS, UMR5238, 69008 Lyon, France
- 65Université de Lyon, 69008 Lyon, France
- 66Department of Experimental Medicine and Biochemical Sciences, University of Rome 'Tor Vergata', 00133 Rome, Italy
- 67Department of Pathology, Stony Brook University, Stony Brook, NY 11794-8691, USA
- 68Department of Molecular Oncology, Göttingen Center of Molecular Biosciences, 37077 Göttingen, Germany
- 69Faculty of Medicine, University of Göttingen, 37077 Göttingen, Germany
- 70Department of Medical Chemistry, Graduate School of Medicine, University of Kyoto, Kyoto 606-8501, Japan
- 71Merck Research Laboratories, Rahway, NJ 07065-0900, USA
- 72University of Michigan Medical School, Ann Arbor, MI 48109, USA
- 73Department of Molecular Cell Biology, Weizmann Institute of Science, 76100 Rehovot, Israel
- 74Institute of Molecular Biotechnology of the Austrian Academy of Science, 1030 Vienna, Austria
- 75Department of Physiology, Yong Loo Lin School of Medicine, Graduate School for Integrative Sciences and Engineering, National University of Singapore, 117597 Singapore
- 76Singapore-MIT Alliance, National University of Singapore, 117576 Singapore
- 77Duke-NUS Graduate Medical School, 169547 Singapore
- 78Ben May Department for Cancer Research, University of Chicago, Chicago, IL 60637, USA
- 79Laboratory of Cell Biology, National Institute for Infectious Diseases IRCCS 'L. Spallanzani', 00149 Rome, Italy
- 80Department of Biology, University of Rome 'Tor Vergata', 00133 Rome, Italy
- 81Department of Physiology and Medical Physics, Royal College of Surgeons in Ireland, Dublin 2, Ireland
- 82Department of Biochemistry, La Trobe University, 3086 Victoria, Australia
- 83Laboratorio de Inmunopatología, Instituto de Biología y Medicina Experimental (IBYME- CONICET), C1428 Buenos Aires, Argentina
- 84Department of Biomedical Sciences, University of Padova, 35121 Padova, Italy
- 85iMed.UL, Faculty of Pharmacy, University of Lisbon, 1649-003 Lisbon, Portugal
- 86Cambridge Institute for Medical Research, Cambridge CB2 0XY, UK
- 87Biocenter, University of Würzburg, 97074 Würzburg, Germany
- 88Department of Cell Physiology and Metabolism, University of Geneva Medical School, 1211 Geneva, Switzerland
- 89Dulbecco-Telethon Institute, Venetian Institute of Molecular Medicine, 35129 Padova, Italy
- 90Department of Pharmacology, University of Bern, 3010 Bern, Switzerland
- 91Laboratory of Apoptosis and Cancer Biology, The Rockefeller University, New York, NY 10065, USA
- 92Department of Biochemistry, University of Lausanne, 1066 Epalinges, Switzerland
- 93Department of Medical Genetics, Osaka University Medical School, Osaka 565-0871, Japan
- 94Department for Molecular Biomedical Research, VIB, 9052 Ghent, Belgium
- 95The Beatson Institute for Cancer Research, Glasgow G61 1BD, UK
- 96Biochemistry Section, Surgical Neurology Branch, National Institute of Neurological Disorders and Stroke, NIH, Bethesda, MD 20892, USA
- 97Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA
- 98Institute of Environmental Medicine, Division of Toxicology, Karolinska Institute, SE- 171 77 Stockholm, Sweden
Correspondence: G Kroemer, INSERM, U848, Institut Gustave Roussy, PR1, 39, rue Camille Desmoulins, F-94805 Villejuif, France. Tel: +33-1-4211-6046; Fax: +33-1-4211-6047; E-mail: kroemer@orange.fr
Received 12 March 2009; Accepted 17 March 2009; Published online 17 April 2009.
Abstract
Cell death is essential for a plethora of physiological processes, and its deregulation characterizes numerous human diseases. Thus, the in-depth investigation of cell death and its mechanisms constitutes a formidable challenge for fundamental and applied biomedical research, and has tremendous implications for the development of novel therapeutic strategies. It is, therefore, of utmost importance to standardize the experimental procedures that identify dying and dead cells in cell cultures and/or in tissues, from model organisms and/or humans, in healthy and/or pathological scenarios. Thus far, dozens of methods have been proposed to quantify cell death-related parameters. However, no guidelines exist regarding their use and interpretation, and nobody has thoroughly annotated the experimental settings for which each of these techniques is most appropriate. Here, we provide a nonexhaustive comparison of methods to detect cell death with apoptotic or nonapoptotic morphologies, their advantages and pitfalls. These guidelines are intended for investigators who study cell death, as well as for reviewers who need to constructively critique scientific reports that deal with cellular demise. Given the difficulties in determining the exact number of cells that have passed the point-of-no-return of the signaling cascades leading to cell death, we emphasize the importance of performing multiple, methodologically unrelated assays to quantify dying and dead cells.
Keywords:
apoptosis, caspases, cytofluorometry, immunofluorescence microscopy, mitotic catastrophe, necrosis
Abbreviations:
AIF, apoptosis-inducing factor; AO, acridine orange; CMXRos, chloromethyl-X-rosamine; Cyt c, cytochrome c; 
m, mitochondrial transmembrane potential; DAPI, 4',6-diamidino-2-phenylindole; DiOC6(3), 3,3'dihexiloxalocarbocyanine iodide; EB, ethidium bromide; ELISA, enzyme-linked immunosorbent assay; GFP, green fluorescent protein; H2DCFDA, 2',7'-dichlorodihydrofluorescein diacetate; HE, hydroethidine; HPLC, high-pressure liquid chromatography; HTS, high-throughput screening; IMS, mitochondrial intermembrane space; JC-1, 5,5',6,6'-tetrachloro-1,1',3,3'-tetraethylbenzimidazolcarbocyanine iodide; LDH, lactate dehydrogenase; MOMP, mitochondrial outer membrane permeabilization; MPT, mitochondrial permeability transition; MS, mass spectrometry; MTS, 3-(4,5-dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H-tetrazolium; MTT, 3-[4,5-dimethylthiazol-2-yl]-2,5-diphenyl tetrazolium bromide; NCCD, Nomenclature Committee on Cell Death; NMP, nuclear matrix protein; NMR, proton nuclear magnetic resonance; PI, propidium iodide; TMRM, tetramethylrhodamine methyl ester; TUNEL, terminal deoxynucleotidyl transferase-mediated dUTP nick-end labeling; WST-1, 4-[3-(4-iodophenyl)-2-(4-nitrophenyl)-2H-5-tetrazolio]-1,3-benzene disulfonate
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