 Materials and methods
Patients
Forty-six patients who were transplanted for acute leukemia between November 1991 and July 1998 with BM (n = 30) or PBSC (n = 16) at our institution were studied (Table 1). Thirty-five patients were diagnosed with acute myeloid leukemia (AML), and 11 patients were diagnosed with acute lymphoblastic leukemia (ALL). Approval for this study was obtained from the Institutional Review Board on Medical Ethics at the Essen University Hospital. All patients gave informed consent before material was obtained.
Patients were transplanted in first remission (1st CR, 24 patients), second or third remission (2nd CR or 3rd CR, nine patients), and in relapse (REL, 13 patients).
Twenty-nine donor/recipient pairs were matched at the HLA-A, B, C and DR loci and were nonreactive in mixed lymphocyte culture (MLC), and 17 patients received a graft from a HLA partially matched donor. Ten patients received grafts from unrelated donors, 36 patients were transplanted with grafts from family donors.
Conditioning regimens and GVHD prophylaxis
The conditioning regimen consisted in 39 patients of cyclophosphamide (60 mg/kg/day ´ 2) and fractioned total body irradiation (TBI) delivered by a cobalt source in 4 daily fractions of 2.5 Gy to a total dose of 10 Gy. Two patients received busulfan (4.0 mg/kg/day for 4 days) followed by cyclophosphamide (60 mg/kg/day ´ 2), and five, busulfan (4.0 mg/kg/day for 4 days), thiotepa (5 mg/kg/day for 2 days) and cyclophosphamide (60 mg/kg/day ´ 2).
Two patients who were retransplanted with PBSCs received a conditioning regimen consisting of busulfan (4.0 mg/kg/day for 4 days), fludarabine (30 mg/m2 for 6 days) and anti-T lymphocyte globuline (10.0 mg/kg/day for 4 days). With the exception of one, all transplants were performed without prior ex vivo removal of donor lymphocytes from the graft. Irradiated leukocyte-depleted blood products were exclusively used for blood component substitution throughout the post-transplant course.
Prophylaxis of acute GVHD of patients treated by allogeneic transplantation consisted of short-course methotrexate and cyclosporin A (CsA) in 35 patients,11 of CsA alone in 10 patients, and one patient received a T cell-depleted peripheral blood stem cell graft (Table 1).
Morphology and cytogenetics
AML was diagnosed based on standard FAB morphological and cytochemical criteria. Chromosome analyses were performed on bone marrow cells (24 and/or 48 h in vitro culture with GTG (G bands obtained by trypsin and stained with Giemsa)).
Isolation of RNA and cDNA synthesis and reverse transcription (RT)
RNA was prepared from peripheral blood cells, Kasumi-1 and K562 cells as positive control for RT-PCR. RNA was extracted by the acid guanidium/phenol/chloroform method.12 For each PCR, cDNA was synthesized from 2 g of total RNA with 200 U Moloney murine leukemia virus (Mo-MuLV) reverse transcriptase (Gibco-BRL, Gaithersburg, MD, USA) in PCR buffer (50 mmol/l KCl, 10 mmol/l Tris-HCl pH 8.3, 1.5 mmol/l MgCl2, 0.001% gelatin (Perkin-Elmer-Cetus, Weiterstadt, Germany), using random hexamers (10 mmol/l) (Boehringer, Mannheim, Germany), deoxynucleotide triphosphates dNTP; 1 mmol/l each), 20 U RNAsin at a final volume of 20 l at 37°C for 1 h.
Detection of wt-1 gene product
Ten l of cDNA was used in a total volume of 50 l containing 1´ PCR buffer 50 mmol/l KCl, 10 mmol/l Tris-HCl pH 8.3, 1.5 mmol/l MgCl2 0.001% gelatin (Perkin-Elmer-Cetus), 0.2 mmol/l each of NTP, 2.5 U Taq polymerase (Perkin-Elmer-Cetus) and 0.3 mol/l of each of the primers WT1, 5'-GGCATCTGAGACCAGTGAGAA-3' and WT2, 5'-GAGAGTCAGACTTGAAAGCAGT-3'.13 After an initial denaturation step of 3 min at 94°C, 30 s cycles consisting of 15 s at 94°C, 30 at 60°C and 45 s at 72°C were performed followed by a final extension of 10 min at 72°C.
In the second round of PCR 2 l of the first PCR products were added in a 50 l total volume containing 1 ´ PCR buffer, 50 mmol/l KCl, 10 mmol/l Tris-HCl pH 8.3, 1.5 mmol/l MgCl2, 0.001% gelatin, 200 mol/l of each NTP, 0.3 l of inner primers WT3, 5'-GCTGTC- CCACTTACAGATGCA-3', and WT4, 5'-TCAAAGCGC- CAGCTGGAG TTT-3',13 and 2.5 U Taq DNA polymerase. Amplification was performed with an initial denaturation step of 3 min at 94°C, followed by 30 cycles of denaturation at 94°C for 15 s, annealing at 60°C for 30 s and 45 s extension at 72°C with a final extension of 10 min at 72°C.
The PCR product was amplified as a band at 481 bp (WT1WT2) or 343 bp (WT3WT4) on a 1.5% agarose gel stained with ethidium bromide (WT1WT2 product not shown).
Detection of pml-rar , aml1-eto, cbf -myh11, mll/af4, bcr-abl gene products
RT-PCR of pml-rar , aml1-eto, cbf -myh11, mll/af4, bcr-abl gene products were performed with specific nested primers as previously described.14,15,16,17,18
RNA quality control
The glyceraldehyde-3-phosphate dehydrogenase (GAPDH) messenger RNA was coamplified as a control in all RT-PCR.14,19 From all samples, the cDNA was divided into two tubes. One tube was used as a RNA quality control containing a final volume of 25 ml with 1´ PCR buffer with 50 mmol/l KCl, 10 mmol/l Tris-HCl pH 8.3, 1.5 mmol/l MgCl2, 0.001% gelatin (Perkin-Elmer-Cetus), 0.2 mmol/l each of NTP, 2.5 U Taq polymerase (Perkin-Elmer-Cetus) and 12 pmol/l of each GAPDH specific primers, which results in a positive 200 bp band from all human RNA and therefore controls for the quality of RNA and successful PCR amplification.14,19
PCR controls
Elaborate measures were taken to minimize contamination following the recommendations of Kwok and Higuchi.20 All PCR products were kept in separate laboratory rooms from patient samples, RNA and PCR reagents.
Blank controls were included in all RNA extraction procedures as negative controls to assess quality and cross-contamination between samples. Cells from NB-4, Kasumi-1, SD-1 and MV4-11 cell lines, and cells of a cbf /myh11-positive patient were included as a positive control.
For a patient sample to be considered negative for any PCR amplification, it had to: (1) be amplified in two independent experiments using 2.0 g of total cellular RNA per reaction; (2) be successfully coamplified for the GAPDH transcript in each reaction; (3) be successfully coamplified for a positive control in both reactions.
Oligonucleotide primers were synthesized on an Applied Biosystems 380 B DNA synthesizer (Foster City, CA, USA).
Sensitivity of PCR assays
A sensitivity of 1:105 PCR was obtained for PCR of mll-af4, cbf -myh11, aml1-eto, pml-rar gene transcripts as previously published.14,15,16,17,18
To assess the sensitivity of the RT-PCR amplification of wt-1 gene transcripts, 1 g of total RNA isolated from cells of K562 cell line was serially diluted in RNA isolated from mononuclear peripheral blood cells of a healthy donor. The resulting cDNA was then submitted to 30 cycles of amplification with primers WT1 and WT2, followed by 30 cycles of amplification with nested primers WT3 and WT4. A sensitivity of 1:105 was measured for wt-1.
Definition of relapse
Hematologic relapse was diagnosed on the basis of standard hematological criteria.
Clinical evaluation and statistical analysis
The diagnosis of acute and chronic GVHD was based on the characteristic clinical appearance of the symptoms of organ involvement. Grading of acute or chronic GVHD followed commonly accepted criteria.21,22
Differences between frequencies were compared by the two-tailed Fisher exact test.
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