Correction to: Nature Microbiology https://doi.org/10.1038/s41564-019-0461-2, published online 27 May 2019.

In the original version of this Article, a black box highlighting a specific data point in Fig. 3d, later discussed in the main text, was missing; this has now been amended and the correct Fig. 3d is shown below. The figure legend associated with Fig. 3d has also been updated to reflect this change. Additionally, author Sebastien Dechavanne, who should have followed author Nichole D. Salinas and preceded author Benoit Witkowski, was mistakenly missed from the author list; this has now been amended and the following statement has been added to the ‘Author contributions’ section: “S.D. performed experiments and provided results to address reviewer comments during the revision process”.

Fig. 3
figure 1

Original and Corrected.

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