Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Article
  • Published:

THZ1 reveals CDK7-dependent transcriptional addictions in pancreatic cancer

Abstract

Pancreatic ductal adenocarcinoma (PDAC) is a lethal malignancy with high mortality. Lack of effective treatment makes novel therapeutic discovery an urgent demand in PDAC research. By screening an epigenetic-related compound library, we identified THZ1, a covalent inhibitor of CDK7, as a promising candidate. Multiple long-established and patient-derived PDAC cell lines (PDC) were used to validate the efficacy of THZ1 in vitro. In addition, patient-derived xenograft (PDX) models and animal models of PDAC were utilized for examining THZ1 efficacy in vivo. Furthermore, RNA-Seq analyse was performed to reveal the molecular mechanism of THZ1 treatment. Finally, PDAC cell lines with primary or acquired resistance to THZ1 were investigated to explore the potential mechanism of THZ1 susceptibility. CDK7 inhibition was identified as a selective and potent therapeutic strategy for PDAC progression in multiple preclinical models. Mechanistic analyses revealed that CDK7 inhibition led to a pronounced downregulation of gene transcription, with a preferential repression of mitotic cell cycle and NF-κB signaling-related transcripts. MYC transcriptional was found to be involved in susceptibility of PDAC cells to CDK7 inhibition. In conclusion, Identification of CDK7-dependent transcriptional addiction in PDACs provides a potent therapeutic strategy that targets highly aggressive pancreatic cancer.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6

Similar content being viewed by others

References

  1. Yadav D, Lowenfels AB. The epidemiology of pancreatitis and pancreatic cancer. Gastroenterology. 2013;144:1252–61.

    Article  Google Scholar 

  2. Edu CGAR. Integrated genomic characterization of pancreatic ductal adenocarcinoma. Cancer Cell. 2017;32:185.

    Article  Google Scholar 

  3. Waddell N, Pajic M, Patch AM, Chang DK, Kassahn KS, Bailey P, et al. Whole genomes redefine the mutational landscape of pancreatic cancer. Nature. 2015;518:495–501.

    Article  CAS  Google Scholar 

  4. Witkiewicz AK, Mcmillan EA, Balaji U, Baek G, Lin WC, Mansour J, et al. Whole-exome sequencing of pancreatic cancer defines genetic diversity and therapeutic targets. Nat Commun. 2015;6:6744.

    Article  CAS  Google Scholar 

  5. Ryan DP, Hong TS, Bardeesy N. Pancreatic adenocarcinoma. New Engl J Med. 2014;371:1039.

    Article  CAS  Google Scholar 

  6. Hidalgo M. Pancreatic cancer. New Engl J Med. 2010;362:1605–17.

    Article  CAS  Google Scholar 

  7. Wang Y, Zhang T, Kwiatkowski N, Abraham BJ, Tong IL, Xie S, et al. CDK7-dependent transcriptional addiction in triple-negative breast. Cancer Cell. 2015;163:174.

    CAS  Google Scholar 

  8. Franco HL, Kraus WL. No driver behind the wheel? Targeting transcription in cancer. Cell. 2015;163:28–30.

    Article  CAS  Google Scholar 

  9. Cao Kaixiang, Shilatifard Ali. Inhibit globally, act locally: CDK7 inhibitors in cancer therapy. Cancer Cell. 2014;26:158–59.

    Article  CAS  Google Scholar 

  10. Kwiatkowski N, Zhang T, Rahl PB, Abraham BJ, Reddy J, Ficarro SB, et al. Targeting transcription regulation in cancer with a covalent CDK7 inhibitor. Nature. 2014;511:616–20.

    Article  CAS  Google Scholar 

  11. Chipumuro E, Eugenio M, Camilla LC, Kwiatkowski N, Zhang T,Hatheway CM, et al. CDK7 inhibition suppresses super-enhancer-linked oncogenic transcription in MYCN-driven cancer. Cell 2014;1126–39.

    Article  CAS  Google Scholar 

  12. Christensen CL, Kwiatkowski N, Abraham BJ, Carretero J, Alshahrour F, Zhang T, et al. Targeting transcriptional addictions in small cell lung cancer with a covalent CDK7 inhibitor. Cancer Cell. 2014;26:909–22.

    Article  CAS  Google Scholar 

  13. Jiang YY, Lin DC, Mayakonda A, Hazawa M, Ding LW, Chien WW, et al. Targeting super-enhancer-associated oncogenes in oesophageal squamous cell carcinoma. Gut. 2017;511:1358–68.

    Article  Google Scholar 

  14. Yuan J, Jiang YY, Mayakonda A, Huang M, Ding LW, Lin H, et al. Super-enhancers promote transcriptional dysregulation in nasopharyngeal carcinoma. Cancer Res. 2017;77:6614–23.

    Article  CAS  Google Scholar 

  15. Zhang Z, Peng H, Wang X, Yin X, Ma P, Jing Y, et al. Preclinical efficacy and molecular mechanism of targeting CDK7-dependent transcriptional addiction in ovarian cancer. Mol Cancer Ther. 2017;16:1739–50.

    Article  CAS  Google Scholar 

  16. Wong R, Ngoc P, Leong WZ, Yam A, Zhang T, Asamitsu K, et al. Enhancer profiling identifies critical cancer genes and characterizes cell identity in adult T-cell leukemia. Blood. 2017;130:2326–38.

    Article  CAS  Google Scholar 

  17. Wang X, Lu X, Zhang T, Wen C, Shi M, Tang X, et al. mir-329 restricts tumor growth by targeting grb2 in pancreatic cancer. Oncotarget. 2016;7:21441.

    PubMed  PubMed Central  Google Scholar 

  18. Hessmann E, Johnsen SA, Siveke JT, Ellenrieder V. Epigenetic treatment of pancreatic cancer: is there a therapeutic perspective on the horizon? Gut. 2017;66:168–79.

    Article  CAS  Google Scholar 

  19. Mazur PK, Herner A, Mello SS, Wirth M, Hausmann S, Sánchez-Rivera FJ, et al. Combined inhibition of BET family proteins and histone deacetylases as a potential epigenetics-based therapy for pancreatic ductal adenocarcinoma. Nat Med. 2015;21:1163–71.

    Article  CAS  Google Scholar 

  20. Garcia PL, Miller AL, Kreitzburg KM, Council LN, Gamblin TL, Christein JD, et al. The BET bromodomain inhibitor JQ1 suppresses growth of pancreatic ductal adenocarcinoma in patient-derived xenograft models. Oncogene. 2016;35:833–45.

    Article  CAS  Google Scholar 

  21. Tang Z, Li C, Kang B, Gao G, Li C, Zhang Z. GEPIA: a web server for cancer and normal gene expression profiling and interactive analyses. Nucleic Acids Res. 2017;45:W98–W102.

    Article  CAS  Google Scholar 

  22. Hidalgo M, Amant F, Biankin AV, Budinská E, Byrne AT, Caldas C, et al. Patient-derived xenograft models: an emerging platform for translational cancer research. Cancer Discov. 2014;4:998–1013.

    Article  CAS  Google Scholar 

  23. Hingorani SR, Wang L, Multani AS, Combs C, Deramaudt TB, Hruban RH, et al. Trp53R172H and KrasG12D cooperate to promote chromosomal instability and widely metastatic pancreatic ductal adenocarcinoma in mice. Cancer Cell. 2005;7:469–83.

    Article  CAS  Google Scholar 

  24. Guerra C, Collado M, Navas C, Schuhmacher AJ, Hernández-Porras I, Cañamero M, et al. Pancreatitis-induced inflammation contributes to pancreatic cancer by inhibiting oncogene-induced senescence. Cancer Cell. 2011;19:728–39.

    Article  CAS  Google Scholar 

  25. Wong MH, Xue A, Julovi SM, Pavlakis N, Samra JS, Hugh TJ, et al. Cotargeting of epidermal growth factor receptor and PI3K overcomes PI3K-Akt oncogenic dependence in pancreatic ductal adenocarcinoma. Clin Cancer Res. 2014;20:4047–58.

    Article  CAS  Google Scholar 

  26. Wu CY, Carpenter ES, Takeuchi KK, Halbrook CJ, Peverley LV, Bien H, et al. PI3K regulation of RAC1 is required for KRAS-induced pancreatic tumorigenesis in mice. Gastroenterology. 2014;147:1405–16.

    Article  CAS  Google Scholar 

  27. Corcoran RB, Contino G, Deshpande V, Tzatsos A, Conrad C, Benes CH, et al. STAT3 plays a critical role in KRAS-induced pancreatic tumorigenesis. Cancer Res. 2015;71:5020–29.

    Article  Google Scholar 

  28. Rachmilewitz M, Izak G, Hochman A, Aronovitch J, Grossowicz N. Critical role of NF-κB in pancreatic cancer. Oncotarget. 2014;5:10969–75.

    Google Scholar 

  29. Lovén J, Orlando DA, Sigova AA, Lin CY, Rahl PB, Burge CB, et al. Revisiting global gene expression analysis. Cell. 2012;151:476–82.

    Article  Google Scholar 

  30. Wang J, Hu K, Guo J, Cheng F, Jing L, Jiang W, et al. Suppression of KRas-mutant cancer through the combined inhibition of KRAS with PLK1 and ROCK. Nat Commun. 2016;7:11363.

    Article  CAS  Google Scholar 

  31. Guo J, Kleeff J, Li J, Ding J, Hammer J, Zhao Y, et al. Expression and functional significance of CDC25B in human pancreatic ductal adenocarcinoma. Oncogene. 2004;23:71–81.

    Article  Google Scholar 

  32. Ling J, Kang Y, Zhao R, Xia Q, Lee D, Chang Z, et al. Kras G12D -induced IKK2/β/NF-κB activation by IL-1α and p62 feedforward loops is required for development of pancreatic ductal adenocarcinoma. Cancer Cell. 2012;21:105–20.

    Article  CAS  Google Scholar 

  33. Ochiai T, Saito Y, Saitoh T, Dewan MZ, Shioya A, Kobayashi M, et al. Inhibition of IkappaB kinase beta restrains oncogenic proliferation of pancreatic cancer cells. J Med Dent Sci. 2008;55:49–59.

    PubMed  Google Scholar 

  34. Gao Y, Zhang T, Terai H, Ficarro SB, Kwiatkowski N, Hao MF, et al. Overcoming resistance to the THZ series of covalent transcriptional CDK inhibitors. Cell Chem Biol. 2017;25:135–42.

    Article  Google Scholar 

Download references

Author contributions

J.X., P.L., and Y.T. designed experiment, interpreted data, and wrote the manuscript; P.L., J.G., and L.Z. performed most of the experiments; Y.W., N.N., and F.L. assisted in some experiments; Y.F., Y.-W.S., and Z.-G.Z. provided the key materials; J.X., Y.T. and L.-W.W. provided the overall guide.

Funding

This work was supported by the Program for professor of Special Appointment (Eastern Scholar) at Shanghai Institutions of Higher Learning No.TP2015007 to J.X., TP2015017 to Y.T.), National Natural Science Foundation of China (81702938 and 81770628 to J.X.; 81572761 and 81772655 to Y.T.), Shanghai Municipal Education Commission-Gaofeng Clinical Medicine Grant Support No.20161312 (J.X.), The Recruitment Program of Global Experts of China (National 1000-Youth Talents Program to Y.T.), Shanghai Rising-Star Program (Y.T.).

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Li-Wei Wang, Yujie Tang or Jing Xue.

Ethics declarations

Conflict of interest

The authors declare that they have no conflict of interest.

Additional information

Publisher’s note: Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary information

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Lu, P., Geng, J., Zhang, L. et al. THZ1 reveals CDK7-dependent transcriptional addictions in pancreatic cancer. Oncogene 38, 3932–3945 (2019). https://doi.org/10.1038/s41388-019-0701-1

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/s41388-019-0701-1

This article is cited by

Search

Quick links