A genetic association study of 1,068 cases and 4,242 controls has revealed that an insertion of eight residues in HLA-DQβ1 (at position 227–234) and amino acid substitutions in HLA-DQα1 (at position 41) and HLA-DQβ1 (at position 45) all confer a risk of achalasia. Given the strength of the MHC association signal, the authors suggest there is a role for immune-mediated processes in the development of idiopathic achalasia.