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Genomics, the science of whole genomes, differs in approach, breadth and emphasis from genetics, which focuses on the roles and inheritance of individual genes and their variants. Genomics encompasses the development and application of technologies for the comprehensive study of the biology of cells, tissues, whole organisms and even populations. It includes genome sequence analysis, as well as studies of gene expression, protein products and metabolites. The data from such studies have advanced such diverse areas as evolution, developmental biology, drug development and clinical diagnosis. Examples of applications are as diverse as comparative sequence analysis, tumour microarray expression profiling, whole-genome analysis for disease-association studies and hand-held sensors that identify airborne pathogens.

Although policy issues can be categorized in different ways, we consider five main areas of genome policy (Box 1): research issues; legal issues; economic issues; educational issues; and acceptance and implementation. The natural history of any genome advance or application, from the discovery stage through to translation, production and both professional and public acceptance, can be considered in terms of these broad categories. Many policy issues have arisen in response to genetic advances and applications, but the broader scale of genome sciences expands and potentially exacerbates them, and gives rise to new issues. Although presented here in discrete categories (Box 1), genome policy is actually a complex network of issues, whereby one issue can influence or be dependent on another.

Various approaches have been taken to address genome policy issues (Box 2). Although some issues are amenable to a measured and deliberate approach, others require a more rapid response. The approaches that are taken are influenced not only by the issue itself, but by different governments, levels of scientific understanding, cultural attitudes to science and technology and health-care systems. Given the diversity of factors, there is no right or wrong approach to addressing a particular policy issue. However, in reviewing the different approaches that can be taken, two important themes emerge: the involvement of multiple stakeholders and the need for solid scientific and (where applicable) clinical data.

Expert opinion or authority has traditionally served as the backbone for policy decision making. As public opinion is not generally formed on the basis of expert knowledge, their perspectives can be marginalized. The association between the concerns of the public and low scientific literacy is known as the 'knowledge deficit' model1,2. In recent years, however, this model has come under heavy criticism. Studies have revealed conflicting data regarding the relationship between scientific knowledge and attitudes, showing that it is more complex than is frequently appreciated3,4,5,6,7,8. An alternative view holds that scientific knowledge is but one facet of public understanding of science. 'Institutional knowledge' (that is, the political processes that are relevant to science policy) and 'social knowledge' (the relevance of scientific applications to local or personal circumstances) also inform public understanding of science9.

In some settings, dependence on expert opinion is giving way to a more inclusive policy-making process, reflecting both a growing distrust of government and industry and a greater awareness of the broad social and ethical implications of genetics and genomics10. It has even been suggested that it is the experts who have a knowledge deficit in understanding the views of the lay public11. Whereas past efforts focused on enhancing public science literacy, current efforts have moved towards increased public consultation and engagement12. Indeed, an inverse relationship between science literacy and trust was documented during the human cloning debate13.

In this Perspective, from our complementary viewpoints of scientific and policy research, we provide an overview of some of the issues that exist within each category of genome policy (Box 1), describe various approaches that are used to address these issues, and highlight the importance of the engagement of stakeholders in policy-making decisions.

Research policy issues

Over the past 20 years, several organizations have been established to advance genome research, including Genome Canada, the US National Human Genome Research Institute (NHGRI), Genoma España, Instituto Nacional de Medicina Genómica (Mexico), the Riken Genomic Sciences Center (Japan) and the Sanger Institute (United Kingdom). Their accomplishments have been facilitated by policies that are related to the planning and conduct of genome research. Research policy issues include prioritization of research, allocation of funds and access to research data.

Research prioritization and allocation. Research prioritization and allocation are crucial to the development of a balanced research portfolio, whether private or public. Priorities are often decided by the scientific elite, in their positions as members of national advisory councils of scientific funding agencies. In the United States, every research institute within the National Institutes of Health (NIH) has its own advisory council, and at least one seat on each is reserved for a member of the public. Each council can solicit feedback from the general scientific community if desired; the current NHGRI vision for genomics research, for example, was informed by extramural as well as intramural scientists, administrators and advisors14.

Budget allocation is a high-stakes affair that involves government agencies, legislative bodies, lobbyists, special interest groups, professional organizations and industry. As the genome sciences become a large component of other areas in life sciences and biomedical research, it will be important to avoid a duplication of efforts through resource sharing and coordination of research priorities by multiple agencies or councils. In the United Kingdom, for example, the importance of continued genome research following the completion of the Human Genome Project was recognized by several research councils as a top priority.

Public dialogue about research prioritization will inevitably reveal a range of stakeholder perspectives. Dissatisfaction with current funding policies and/or personal interest in a specific disease or research area has led to an increase in the number of private foundations as an alternative source of funding. For example, advocates for breast cancer research have educated themselves not only about science, but also about the policy-making process, and have been extremely vocal and persuasive in increasing support for breast cancer research.

Access to research data and materials. One of the most notable aspects of research in the genome sciences is the sheer size and complexity of the data sets that are produced. Genomic data are collected and stored in a digital format, which enables rapid data sharing and the development of public databases. One of the significant policy decisions of the early genome era was to provide open access to basic research data15,16, which promises to lessen what would otherwise be substantial differences in research capacities between different laboratories, in both developed and developing nations. The successful implementation of open-access policies was contingent on active participation by data producers, users and funding agencies. In recent years, however, the threat of bioterrorism has raised concerns regarding the potential 'dual use' of genomic data17. Although open access to basic genomic information has accelerated research, widespread debate has ensued about data sharing of genome sequences and other data related to pathogens. As a result, advisory committees such as the US National Science Advisory Board for Biosecurity were formed.

In contrast to data-access policies, which are typically decided by small groups of experts and policy makers, sample-access policies have been increasingly influenced by patient groups and advocacy organizations. For example, the identification of the genes that cause cardiofaciocutaneous (CFC) syndrome and pseudoxanthoma elasticum (PXE) was made using samples collected by CFC International and PXE International, respectively Refs 18,19. Without these organizations, researchers would probably not have been able to collect sufficient patient samples, nor would they have had the workforce to achieve their study goals in a reasonable time frame.

Legal issues

As new genome technologies are developed, several legal issues have emerged, including regulatory oversight of applications such as microarray-based diagnostics, intellectual property, genetic discrimination, privacy and protection of research subjects. In particular, intellectual property and genetic discrimination have dominated the legal landscape in genomics. Many legal issues are addressed through new or revised government regulations, legislation and court rulings.

Intellectual property. The early patenting successes of recombinant DNA technology, followed by favourable court rulings and legislation encouraging the patenting of government-supported research innovations, led to a biotechnology industry that is dependent, in part, on a strong intellectual property portfolio20. However, over the past decade, intellectual property laws and licensing practices of genes and genetic material have been controversial21,22,23,24,25. Concerns have been raised about the under-utilization of patented resources due to limited access and benefit sharing (“...fair and equitable sharing of the benefits arising out of the utilization of genetic resources”26), and the effects on research, innovation and clinical services27,28. Furthermore, new challenges are posed by discoveries that involve the analysis of large numbers of genes or even entire genomes (Box 3).

Various mechanisms have been used to address intellectual property issues, including revisions to regulations, case law and development of guidance documents. For example, in response to public concerns about the overly broad nature of patenting and the lack of demonstrated utility of many genetic patents, the US examination guidelines have been revised to require that a technology has a more specific use in order to be patentable29. In Europe, a decade-long debate led to the adoption of an EU Biotechnology Directive, which was then incorporated into the patenting criteria of the European Patent Office30.

Collaboration between patient organizations and researchers has led to patient representatives being named as co-inventors on patent applications31. These potentially overlooked stakeholders have collaborated not only in the collection and provision of often difficult-to-collect samples (as described above in the case of CFC and PXE), but also in data collection and analysis. The recognition of these contributions has resulted in the redistribution of financial benefits, and has potentially strengthened the partnership between investigator and patient groups. In any future changes to the patent system it is crucial to consider the views of and effects on such groups, as well as government, industry, professional organizations, academia and the public32.

Genetic discrimination. The use of genetic information in decisions regarding health insurance, life insurance and employment has been a global concern of patients, families, health professionals and research participants alike. In 1997, the United Nations Educational, Scientific and Cultural Organisation (UNESCO) declared that “...no one shall be subjected to discrimination based on genetic information...”33, a policy that was reiterated in its 2003 report on human genetic data34. Despite such universal statements, implementing protections against discrimination has been a challenge for many countries. Several approaches, including legislation, moratoria and public consultation, have been used to define the extent of and protect against genetic discrimination35.

In the United States, at least 20 bills on genetic discrimination have been introduced in Congress since 1995. However, only the Health Insurance Portability and Accountability Act has passed, providing protection against genetic discrimination for group health plans. More than 30 US states have enacted legislation providing a patchwork of protections against the use of genetic information by health insurers and/or employers. In the United Kingdom, a moratorium on using genetic testing information for insurance underwriting is in effect until 2011 (Ref. 36). In 1999, the Genetics and Insurance Committee was formed to review the use of genetic tests for insurance underwriting purposes. Of the 17 applications that were submitted by the Association of British Insurers, only one has been approved — the test for Huntington disease for life insurance policies over UK£500,000 (Ref. 37). Some have recently called for legislation against genetic discrimination in employment in the United Kingdom, citing evidence of this in the United States and Australia38.

The highly publicized first case of alleged genetic discrimination was filed by the US Equal Employment Opportunity Commission (EEOC) against the US railway company Burlington Northern Santa Fe (BNSF). EEOC alleged that the company tested a group of employees who had filed for worker's compensation for a rare genetic condition without their consent, a violation of the Americans with Disabilities Act. The company reached a US$2.2 million settlement with the EEOC39.

Despite the well-documented fears of genetic discrimination40,41 and the BNSF case, testimony before United States legislators by members of the public and scientific communities has not resulted in protections. Opponents of such protections cite the lack of available empirical data about the practice of genetic discrimination42,43, or about its effect on research44, clinical practice45 or insurance-purchasing behaviour46,47and the threat of increased litigation. The continuing debate was possibly prolonged by an initial 'deficit' in knowledge of stakeholder perspectives and a perceived lack of urgency, highlighting the importance of gathering stakeholder opinions at an early stage.

Oversight. As the number of gene-targeted drugs and diagnostic applications rises, regulatory agencies face the task of assessing their safety and efficacy. Achieving a balance between ensuring safety and effectiveness and allowing innovation is a challenging goal. Therefore, it is important that all parties are involved in the policy-making process — the developers of targeted drugs and diagnostic tests, reference laboratories, government regulatory officials and professional and consumer organizations.

Pharmacogenetic testing is considered one of the most promising clinical applications of genomics research. Tests have the potential to reduce adverse drug responses and the associated costs, and to improve outcomes over a shorter treatment period, by identifying the most appropriate drug and dose. Although, as with any medical innovation, the introduction of pharmacogenetic testing into clinical practice requires evidence of a favourable ratio of benefits and risks. In 2005, on the basis of two public stakeholder meetings, the US Food and Drug Administration (FDA) released a guidance policy on the voluntary submission of pharmacogenomic data48. More recently, the recognition of the need for harmonization in this new field has led to guidelines on the joint processing of voluntary data submissions to the FDA and the European Medicines Agency49,50.

Economic policy issues

Economics is an influential driver of any new field, and economic and trade policy affects public demand, pricing and reimbursement for genomic technology. For example, the successful translation of advances into clinical practice will depend, in part, on the coverage and reimbursement policies of health insurers and health plans (Box 4). Economic policies can affect or be affected by other policy arenas, such as research prioritization, intellectual property and acceptance. For example, much of the growth of the biotechnology and genomics industries has depended on a strong intellectual property portfolio to establish market value, particularly in the absence of revenue-generating products.

An important economic issue is trade policies for genetically modified (GM) products. The GM debate has been dominated by highly publicized fears about the unknown risks that are associated with these crops and related products51, and scientists and other supporters have not been equally vocal about the potential benefits. The public concern regarding the safety of these products for health and the environment has affected national and international policies. However, the World Trade Organization recently upheld a ruling that the European Union moratorium between 1998 and 2004 violated international trade rules. Changes in EU trade policy on labelling and traceability of GM foods and the recent approval of GM corn represent strong steps towards the creation of new markets.

In 2003, a national dialogue was launched in the United Kingdom by an independent steering board to ascertain public views about GM issues52. Despite criticisms that the consultation was limited by funds and time, and that the survey methodologies were flawed, the fact that 37,000 people participated is significant. The report concluded that the overwhelming majority of Britons opposed GM food products and the growing of GM crops. Despite this near consensus against GM crops, the government granted approval of GM maize the following year, raising questions about the legitimacy of the public-consultation process.

Educational policy issues

The successful introduction of genomic applications will greatly depend on the ability of the public to comprehend the purposes, benefits and risks of these products, particularly in health, but also in agriculture, nutrition and other fields. Approaches to enhancing knowledge of genetics and genomics include courses at all levels — secondary school, undergraduate and postgraduate degrees, professional courses (for example, in medical schools and licensing examinations), within university faculties, informal public education campaigns, and through continuing education53. In many areas, changes to public school curricula and content require approval by a school board that consists of elected officials, the significance of which is underscored by the ongoing debates in the United States concerning the teaching of evolutionary theory54. In 2003, the NHGRI created the Education and Community Involvement Branch to help inform the public about genomics research and provide educational resources to teachers, students and consumers. Furthermore, many centre-based grants are required to devote a portion of the budget for training and educational activities.

The importance of education in genetics gained attention in the United Kingdom in a 2003 White Paper55. The report proposed a £50 million 3-year plan to improve education of health professionals in genetics. New uses for genetic and genomic tools, particularly in medicine56, will warrant even broader education initiatives to avoid potential harms such as the misinterpretation of genetic test results57. One of the more prominent recommendations to be implemented was the creation of the National Genetics Education and Development Centre to provide a central training resource in the National Health Service.

Despite the increased recognition of the importance of genetics and genomics education, the proportion of public funds that is devoted to educational efforts is likely to be quite small compared with that devoted to research. In 2002 alone, the Medical Research Council was allocated £54.3 million for post-genome research initiatives, but what proportion of this would be adequate for education, and how should 'adequacy' be measured? It will be crucial for any educational initiative to include an external evaluation component to determine the success of the project in meeting its stated goals, as is required by educational projects that are supported by the US National Science Foundation.

The ability of patients to make informed decisions about their health depends on a clear understanding of both disease risk and options that are available to reduce risk or severity. Therefore, health professionals and manufacturers have an important role through verbal or written communication during the informed consent process, or through printed labels and advertisements58. Currently, however, products that are marketed directly to consumers are not required to disclose detailed information such as outcomes of clinical studies or the specific genes that were tested (Box 5). Although policy changes could improve the information-disclosure requirements, the understanding of such information might still be limited. Consumer fact sheets and talking points have been developed to raise consumer awareness and to highlight important issues to be considered during the decision-making process59.

Acceptance and implementation

The acceptance of genome applications, by both professionals and the public, depends primarily on the perceived benefits and risk. The adoption of new genomics applications will therefore depend on two factors: demonstration of safety and effectiveness; and successful communication of this evidence to the people who will influence the acceptance of the technology. Although the absence of such safety and effectiveness data does not preclude policy decision making, changing initial policies and attitudes after data become available could be extremely challenging.

To outline this point, the acceptance of GM food products has been substantially influenced by the public perception of the risks and benefits to human health and the environment. Although the safety studies that are needed are costly, long and complex, this research is crucial to answering the concerns of the public. But even if safety concerns could be addressed, would demand for these products increase? Policy decisions that are based only on expert data without successful communication to the public are unlikely to satisfy all stakeholders, and therefore acceptance will be limited11.

In medicine, the desire of the public for genome-based tests will be influenced by policies including reimbursement by insurers or the state (and therefore cost-effectiveness) and privacy and discrimination protections. However, demand has not always matched the anticipation for testing60,61, and the demonstration of clinical utility and cost-effectiveness depends, in part, on the implementation of behavioural changes that might be recommended on the basis of such tests. For example, levels of compliance with general public health recommendations, such as recommended dietary allowances62, smoking cessation63 or colon cancer screening64, make it unclear if the addition of genomic information will further motivate individuals. Because genomic information is more individualized, albeit more complex, it is hoped that the public response to this information might be better than it has been to general health recommendations. Data from the few studies that have been carried out so far have been inconsistent about how genomic information will affect behavioural response65,66,67. Results from genomic testing will mostly be in the form of risk probabilities rather than absolute (yes or no) outcomes. Therefore, understanding the likelihood of behaviour modification on the basis of risk probabilities should be prioritized as an important research issue.

Formulating genome policies

Given the dependence of policy making on research, scientists and policy makers should have a fundamental understanding of each other's work. In particular, scientists should be made aware of policy issues, the various approaches that are used to address them, and effective methods to communicate scientific data to non-expert audiences. Other stakeholders, such as disease advocacy groups, have recognized the importance of understanding political processes, educating their members and providing opportunities to engage with policy makers68. In turn, policy makers must understand the scientific process in order to assess scientific evidence in areas such as appropriations, environmental policy and biodefense. We acknowledge, however, that the effectiveness of this suggestion has yet to be demonstrated.

One example of a successful programme to allow scientists to engage in the political process is the American Association for the Advancement of Science's Science & Technology Policy Fellowship Program69. In operation for more than 30 years, this programme started with the placement of 7 scientists in Congressional offices and has expanded to almost a dozen federal agencies, with sponsorship from more than 30 professional societies and more than 100 fellows annually. After completion of the 12-month fellowship, about one-third of the scientists move on to work in the policy sector. However, as this highly competitive programme is limited to a few scientists each year, wider awareness of policy issues might alternatively be achieved with interdisciplinary training programs.

The input of stakeholders is important to the development of effective research policies, particularly for large-scale studies. The International HapMap Project is a successful model of the joint efforts of ethicists, lawyers, scientists, government officials, industry and community representatives in the development of a study design as well as policies on issues such as informed consent and community consultation70. In particular, ethicists were involved alongside scientists in scientific planning phases from the beginning of the project.

Other large-scale studies, such as national biobanks that include samples from up to a million citizens, raise ethical issues that would benefit from input from multiple stakeholders, particularly the public. Given that biobanks depend on public participation, engaging the public remains a crucial step to their success71,72. In Iceland, a brief public consultation was conducted through radio and television programs, town hall meetings and public surveys. By contrast, the United Kingdom embarked on an ambitious 3-year public-consultation campaign through town hall meetings, focus groups, interactive workshops, key informant interviews and calls for comments on draft reports. Although the exchange of information helped to inform policy making, it also sought to raise public awareness about these projects. However, the distinction between a public-relations campaign and a public-consultation or education initiative is an important one to make, as public relations veiled as public consultation can lead to skepticism and mistrust73.

Conclusion

Policy considerations are tightly interwoven throughout all aspects of genome research and applications (Box 1). Just as genomics is enabling medicine to take a more prospective approach, policy making will similarly need to anticipate the likely consequences of the genome sciences as they affect science, health and society. To be effective, those that are involved in policy research and deliberations must connect with other stakeholders in academia, government, industry and the public. The regular exchange of information between stakeholders and policy makers will hopefully lead to policies that are well informed and have a basis in sound scientific data. Ultimately, we all share the goal of advancing scientific knowledge and improving health and well-being. A consensus among stakeholders, including the general public, will greatly help genomic advances to achieve these ends.