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Polyketide synthase chimeras reveal key role of ketosynthase domain in chain branching

Abstract

Biosynthesis of rhizoxin in Burkholderia rhizoxinica affords an unusual polyketide synthase module with ketosynthase and branching domains that install the δ-lactone, conferring antimitotic activity. To investigate their functions in chain branching, we designed chimeric modules with structurally similar domains from a glutarimide-forming module and a dehydratase. Biochemical, kinetic and mutational analyses reveal a structural role of the accessory domains and multifarious catalytic actions of the ketosynthase.

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Figure 1: Polyketide chain branches introduced by polyketide synthase modules.
Figure 2: In vitro lactone and glutarimide formation by chimeric modules.

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References

  1. Hertweck, C. Angew. Chem. Int. Ed. 48, 4688–4716 (2009).

    Article  CAS  Google Scholar 

  2. Partida-Martinez, L.P. & Hertweck, C. Nature 437, 884–888 (2005).

    Article  CAS  PubMed  Google Scholar 

  3. Lackner, G., Partida-Martinez, L.P. & Hertweck, C. Trends Microbiol. 17, 570–576 (2009).

    Article  CAS  PubMed  Google Scholar 

  4. Scherlach, K., Busch, B., Lackner, G., Paszkowski, U. & Hertweck, C. Angew. Chem. Int. Ed. 51, 9615–9618 (2012).

    Article  CAS  Google Scholar 

  5. Partida-Martinez, L.P. & Hertweck, C. ChemBioChem 8, 41–45 (2007).

    Article  CAS  PubMed  Google Scholar 

  6. Scherlach, K., Partida-Martinez, L.P., Dahse, H.-M. & Hertweck, C. J. Am. Chem. Soc. 128, 11529–11536 (2006).

    Article  CAS  PubMed  Google Scholar 

  7. Schmitt, I. et al. ISME J. 2, 632–641 (2008).

    Article  CAS  PubMed  Google Scholar 

  8. Kusebauch, B., Scherlach, K., Kirchner, H., Dahse, H.M. & Hertweck, C. ChemMedChem 6, 1998–2001 (2011).

    Article  CAS  PubMed  Google Scholar 

  9. Nguyen, T. et al. Nat. Biotechnol. 26, 225–233 (2008).

    CAS  PubMed  Google Scholar 

  10. Kusebauch, B., Busch, B., Scherlach, K., Roth, M. & Hertweck, C. Angew. Chem. Int. Ed. 48, 5001–5004 (2009).

    Article  CAS  Google Scholar 

  11. Bretschneider, T. et al. Nature 502, 124–128 (2013).

    Article  CAS  PubMed  Google Scholar 

  12. Heine, D., Sundaram, S., Bretschneider, T. & Hertweck, C. Chem. Commun. (Camb.) 51, 9872–9875 (2015).

    Article  CAS  Google Scholar 

  13. Heine, D., Bretschneider, T., Sundaram, S. & Hertweck, C. Angew. Chem. Int. Ed. 53, 11645–11649 (2014).

    Article  CAS  Google Scholar 

  14. Rajski, S.R. & Shen, B. ChemBioChem 11, 1951–1954 (2010).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  15. Wang, B. et al. Org. Lett. 15, 1278–1281 (2013).

    Article  CAS  PubMed  Google Scholar 

  16. Lim, S.K. et al. J. Biol. Chem. 284, 29746–29756 (2009).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Yin, M. et al. Org. Lett. 16, 3072–3075 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  18. Chen, S. et al. Chem. Biol. 10, 1065–1076 (2003).

    Article  CAS  PubMed  Google Scholar 

  19. Hothersall, J. et al. J. Biol. Chem. 282, 15451–15461 (2007).

    Article  CAS  PubMed  Google Scholar 

  20. Xu, Z. et al. ChemBioChem 15, 1274–1279 (2014).

    Article  CAS  PubMed  Google Scholar 

  21. Calderone, C.T. Nat. Prod. Rep. 25, 845–853 (2008).

    Article  CAS  PubMed  Google Scholar 

  22. Schneider-Poetsch, T. et al. Nat. Chem. Biol. 6, 209–217 (2010).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  23. Bretschneider, T. et al. Nat. Chem. Biol. 8, 154–161 (2012).

    Article  CAS  Google Scholar 

  24. Fuchs, S.W. et al. Angew. Chem. Int. Ed. 52, 4108–4112 (2013).

    Article  CAS  Google Scholar 

  25. Zocher, G. et al. Chem. Sci. 10.1039/C5SC02488A (6 August 2015).

  26. Kelley, L.A. & Sternberg, M.J. Nat. Protoc. 4, 363–371 (2009).

    Article  CAS  PubMed  Google Scholar 

  27. Ji, X.-Y. et al. Chem. Pharm. Bull. (Tokyo) 58, 1436–1441 (2010).

    Article  CAS  Google Scholar 

Download references

Acknowledgements

We thank A. Perner for MS analyses and M. Poetsch for MALDI measurements. We are grateful for financial support by the International Leibniz Research School (to S.S.) and the Studienstiftung des Deutschen Volkes (to D.H.).

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S.S. and C.H. designed experiments; S.S. performed genetic and biochemical experiments and analyzed data; D.H. synthesized substrates and reference compounds; and S.S. and C.H. wrote the manuscript.

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Correspondence to Christian Hertweck.

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The authors declare no competing financial interests.

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Supplementary Results, Supplementary Notes 1 and 2 and Supplementary Figures 1–10. (PDF 3399 kb)

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Sundaram, S., Heine, D. & Hertweck, C. Polyketide synthase chimeras reveal key role of ketosynthase domain in chain branching. Nat Chem Biol 11, 949–951 (2015). https://doi.org/10.1038/nchembio.1932

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