Abstract
Ichthyosis vulgaris (IV) is an inherited scaling skin disorder with a prevalence estimated at 2.29% in China. The gene responsible for this disorder has not been elucidated. To find the disease gene, we ascertained two Chinese IV families. Linkage analysis identified an IV locus on chromosome 1q22 with a maximum two-point Lod score of 2.47 at D1S1653 (θ=0.00). Haplotype analysis placed the critical region in a 7-cM interval defined by D1S1653 and D1S2675. These results provide the basis for further identifying the gene responsible for IV disorder.
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Introduction
Ichthyosis vulgaris (IV) is the common form of inherited scaling disorder, with a prevalence estimated at 1 in 250–5,300 (Wells and Kerr 1966). In the Chinese population, the prevalence is about 2.29% (Lei et al. 1992). The onset of IV is usually within one year after birth. The patients manifest with white scaling on the extensor surfaces of the extremities and occasionally the trunk. Clinical features also include hyperlinearity of the palms and soles, atopy and heat intolerance or keratosis pilaris. Genetically, IV is thought to be an autosomal dominant disorder with virtually complete penetrance (Wells and Kerr 1966).
Although the symptoms of X-linked ichthyosis (XLI) are similar to IV, the format of the scales and involvement of the preauricular area were found to be reliable signs to distinguish them. In XLI patients, scales are mostly large and dark brown, in contrast, small and light-brown scales are seen in IV patients. The presence of lesions was found in 93% of the cases with XLI, while only 17% of the IV patients had ichthyotic lesions at this site (Okano et al.1988). Genetically, the steroid sulphatase gene (STS) responsible for XLI has been mapped to the distal part of the short arm of the X chromosome (Hernandez-Martin et al. 1999).
Due to the difficulties in collecting suitable large affected families, linkage studies to map the gene involved in IV are rarely done. Recently, two multigenerational families with affected individuals showing clinical features of IV but distinct histological features were studied by gene linkage, and the results suggested the epidermal differentiation complex on chromosome 1 might be involved (Compton et al. 2002). Furthermore, strong evidence revealed the crucial importance of filaggrin (encoded by FLG) in normal epidermal function and the molecular basis of IV (Nirunsuksiri et al.1995; Presland et al. 2000). But as far as we know, no mutation of FLG has been found in IV patient. This result suggests that an unknown gene may underlie the pathology of IV disorder. In this study, we collected two affected Chinese IV families with highly similar histological features for linkage analysis, and localized the disease locus to chromosome 1q22.
Subjects and methods
Two three-generation families with isolated autosomal dominant IV were ascertained through initial identification of two probands from Sichuan Province in China. All family members received careful skin examination by an experienced dermatologist. All affected individuals had no evidence of progressive skin disorder. After informed consent was obtained, venous blood samples were collected from affected and unaffected family members. Genomic DNA was extracted from peripheral blood by use of the QIAmp DNA Blood kit (Qiagen, Germany).
In linkage studies, we chose microsatellite markers from the Genome Database. PCR amplifications were carried out according to the manufacturer's recommendation (LI-COR, USA) with a PTC-225 DNA Engine Tetrad (MJ Research, USA). PCR products were electrophoresed on 6% polyacrylamide-7 M urea gels with fluorescent-dye-labeled DNA markers using the LI-COR 4200L DNA sequencer (LI-COR). Following electrophoresis, data were collected and analyzed with Base Image 4.1 and Gene Image 3.12 software (LI-COR). Linkage ready pedigree files were prepared by the use of Gene Image software.
In linkage and haplotype analysis, autosomal dominant inheritance with 100% penetrance was assumed. The affected allele frequency was taken as 0.0001. Marker allele frequencies were set to be uniformly distributed. Two-point linkage analysis was performed using the MLINK and ILINK programs version 5.10 from the Linkage package (Lathrop et al. 1984). Multipoint analysis was conducted by FASTLINK Version 4.1P (Cottingham et al. 1993; Schaffer et al. 1994). Haplotype construction was performed by use of the program SimWalk2 version 2.52 with the aid of Cyrillic Version 2.02 software (Sobel and Lange 1996).
Results and discussion
We first examined the FLG gene in both IV families by sequencing the coding region and the promoter region. We did not detect any mutation in this gene. To identify the disease locus of IV, we performed a genome-wide search using linkage analysis. After yielding a weak supportive Lod score from DNA mark D1S3249 (Zmax=1.81, at θ=0.00), we typed all individuals with more high-density markers that spanned the genetic interval between D1S1665 and D1S1678. Two-point Lod scores for markers covering the candidate interval are summarized in Table 1. The maximum two-point Lod score of 2.47 is obtained at D1S1653 (θ=0.00).
To determine the smallest interval containing the IV locus, recombination events among the family members were analyzed by haplotype reconstruction. The cosegregating segment in which recombination was not detected was flanked by the markers D1S1653 and D1S2675 (Fig. 1a). The locus was mapped to a 7-cM (4-Mb) region on 1q22. A multipoint maximum Lod score of 3.62 was obtained at the genetic position of D1S1167 (Fig. 1b).
The epidermal differentiation complex (EDC) comprises a remarkable cluster of genes that play an important role in terminal differentiation of the human epidermis (Marenholz et al. 1996). This cluster localizes within a 2-Mb region on 1q21. However, there is no overlap between the EDC and the IV locus reported here. This result rules out the candidate genes within EDC. Considering the short physical distance between the EDC and D1S1653 (only 4 Mb), we suggest that a novel gene on 1q22 might underlie the pathology of IV disorder.
References
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Acknowledgements
We are grateful to all of the individuals described here for their contribution to this study, and thank Jesse Pang for critical reading of this manuscript. This work was supported by the National High Technology "863" Programs of China and the National Science Fund for Distinguished Young Scholars.
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W. Zhong and B. Cui contributed equally to this work
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Zhong, W., Cui, B., Zhang, Y. et al. Linkage analysis suggests a locus of ichthyosis vulgaris on 1q22. J Hum Genet 48, 390–392 (2003). https://doi.org/10.1007/s10038-003-0043-1
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DOI: https://doi.org/10.1007/s10038-003-0043-1
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