Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Letter
  • Published:

Localization of pre-mRNA splicing in mammalian nuclei

Abstract

IN mammalian nuclei, precursor messenger RNA splicing factors are distributed non-uniformly. Antibodies directed against struc-tural polypeptides of small nuclear ribonucleoprotein particles (snRNPs)1 and some non-snRNP splicing factors2 have shown that these components are concentrated in about 20-50 nuclear 'speckles'. These and other non-homogeneous distributions have been proposed to indicate nuclear 'compartments' that are distinct from the sites of transcription and in which RNA processing occurs3–9. We have tested this idea using a new approach. Previous structural10–13 and biochemical14–16 data have shown that splicing can occur in association with transcription. Nascent RNA of specific genes can be detected by in situ hybridization as intense spots of nuclear stain which map to the sites of transcription17–19. Here we identify active pre-mRNA splicing sites by localizing the nascent spliced mRNA of specific genes. We find that splicing occurs at the sites of transcription, which are not coincident with intranuclear speckles. We conclude that the nucleus is not compart-mentalized with respect to transcription and pre-mRNA splicing.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Similar content being viewed by others

References

  1. Spector, D. L. Proc. natn. Acad. Sci. U.S.A. 87, 147–151 (1990).

    Article  ADS  CAS  Google Scholar 

  2. Fu, X. D. & Maniatis, T. Nature 343, 437–441 (1990).

    Article  ADS  CAS  Google Scholar 

  3. Spector, D. L. A. Rev. Cell Blol. 9, 265–315 (1993).

    Article  CAS  Google Scholar 

  4. Xing, Y. & Lawrence, J. B. Trends Cell Biol. 3, 346–353 (1993).

    Article  CAS  Google Scholar 

  5. Rosbash, M. & Singer, R. H. Cell 75, 399–401 (1993).

    Article  CAS  Google Scholar 

  6. Carter, K. C., Taneja, K. L. & Lawrence, J. B. J. Cell Biol. 115, 1191–1202 (1991).

    Article  CAS  Google Scholar 

  7. Spector, D. L., Fu, X. D. & Maniatis, T. EMBO J. 10, 3467–3481 (1991).

    Article  CAS  Google Scholar 

  8. Huang, S. & Spector, D. L. Genes Dev. 5, 2288–2302 (1991).

    Article  CAS  Google Scholar 

  9. Xing, Y., Johnson, C. V., Dobner, P. R. & Lawrence, J. B. Science 259, 1326–1330 (1993).

    Article  ADS  CAS  Google Scholar 

  10. Sass, H. & Pederson, T. J. molec. Biol. 180, 911–926 (1984).

    Article  CAS  Google Scholar 

  11. Beyer, A. L. & Osheim, Y. N. Genes Dev. 2, 754–765 (1988).

    Article  CAS  Google Scholar 

  12. Vazquez-Nin, G. H., Echeverria, O. M., Fakan, S., Leser, G. & Martin, T. E. Chromosoma 99, 44–51 (1990).

    Article  Google Scholar 

  13. Wu, Z., Murphy, C., Callan, H. G. & Gall, J. G. J. Cell Biol. 113, 465–483 (1991).

    Article  CAS  Google Scholar 

  14. Aebi, M. & Weissman, C. Trends Genet. 3, 102–107 (1987).

    Article  CAS  Google Scholar 

  15. LeMaire, M. F. & Thummel, C. S. Molec. cell. Biol. 10, 6059–6063 (1990).

    Article  CAS  Google Scholar 

  16. Baurén, G. & Wieslander, L. Cell 76, 183–192 (1994).

    Article  Google Scholar 

  17. O'Farrell, P. H., Edgar, B. A., Lakich, D. & Lehner, C. F. Science 246, 635–640 (1989).

    Article  ADS  CAS  Google Scholar 

  18. Shermoen, A. W. & O'Farrell, P. H. Cell 67, 303–310 (1991).

    Article  CAS  Google Scholar 

  19. Lawrence, J. B., Singer, R. H. & Marselle, L M. Cell 57, 493–502 (1989).

    Article  CAS  Google Scholar 

  20. Valcarcel, J., Singh, R., Zamore, P. D. & Green, M. R. Nature 362, 171–175 (1993).

    Article  ADS  CAS  Google Scholar 

  21. Turner, B. M. & Franchi, L. J. Cell Sci. 87, 269–282 (1987).

    CAS  PubMed  Google Scholar 

  22. Voelkerding, K. & Klessig, D. F. J. Virol. 60, 353–362 (1986).

    CAS  PubMed  PubMed Central  Google Scholar 

  23. Bridge, E., Carmo-Fonseca, M., Lamond, A. I. & Pettersson, U. J. Virol. 67, 5792–5802 (1993).

    CAS  PubMed  PubMed Central  Google Scholar 

  24. Wansink, D. G. et al. J. Cell Biol. 122, 283–293 (1993).

    Article  CAS  Google Scholar 

  25. Jackson, D. A., Hassan, A. B., Errington, R. J. & Cook, P. R. EMBO J. 12, 1059–1065 (1993).

    Article  CAS  Google Scholar 

  26. Fakan, S., Leser, G. & Martin, T. E. J. Cell Biol. 98, 358–363 (1984).

    Article  CAS  Google Scholar 

  27. Jiménez-García, L. F. & Spector, D. L. Cell 73, 47–59 (1993).

    Article  Google Scholar 

  28. Zachar, Z., Kramer, J., Mims, I. P. & Bingham, P. M. J. Cell Biol. 121, 729–742 (1993).

    Article  CAS  Google Scholar 

  29. Séraphin, B. & Rosbash, M. Cell 59, 349–358 (1989).

    Article  Google Scholar 

  30. Taneja, K. L., Lifshitz, L. M., Fay, F. S. & Singer, R. H. J. Cell Biol. 119, 1245–1260 (1992).

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Zhang, G., Taneja, K., Singer, R. et al. Localization of pre-mRNA splicing in mammalian nuclei. Nature 372, 809–812 (1994). https://doi.org/10.1038/372809a0

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1038/372809a0

This article is cited by

Comments

By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing