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The crystal structure of a low-molecular-weight phosphotyrosine protein phosphatase

Abstract

PROTEIN tyrosine phosphorylation and dephosphorylation are central reactions for control of cellular division, differentiation and development1. Here we describe the crystal structure of a low-molecular-weight phosphotyrosine protein phosphatase (PTPase)2, a cytosolic phosphatase present in many mammalian cells. The enzyme catalyses the dephosphorylation of phosphotyrosine-containing substrates3–6, and overexpression of the protein in normal and transformed cells inhibits cell proliferation7,8. The structure of the low-molecular-weight PTPase reveals an α/β protein containing a phosphate-binding loop motif at the amino end of helix αl. This motif includes the essential active-site residues Cys 12 and Arg 18 and bears striking similarities to the active-site motif recently described in the structure of human PTP1B9. The structure of the low-molecular-weight PTPase supports a reaction mechanism involving the conserved Cys 12 as an attacking nucleophile in an in-line associative mechanism. The structure also suggests a catalytic role for Asp 129 in the reaction cycle.

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References

  1. Murray, A. W. Nature 359, 599–604 (1992).

    Article  ADS  CAS  Google Scholar 

  2. Camici, G. et al. J. biol. Chem. 264, 2560–2567 (1989).

    CAS  PubMed  Google Scholar 

  3. Chernoff, J. & Li, H. C. Arch. Biochem. Biophys. 240, 135–145 (1985).

    Article  CAS  Google Scholar 

  4. Ramponi, G. et al. FEBS Lett. 250, 469–473 (1989).

    Article  CAS  Google Scholar 

  5. Stefani, M. et al. FEBS Lett. 329, 131–134 (1993).

    Article  Google Scholar 

  6. Berti, A. FEBS Lett. (in the press).

  7. Ramponi, G. et al. Int. J. Cancer 51, 652–656 (1992).

    Article  CAS  Google Scholar 

  8. Ruggiero, M. et al. FEBS Lett. 326, 294–298 (1993).

    Article  CAS  Google Scholar 

  9. Barford, D., Flint, A. J. & Tonks, N. K. Science 263, 1397–1404 (1994).

    Article  ADS  CAS  Google Scholar 

  10. Su, X-D. et al. FEBS Lett. 343, 107–108 (1994).

    Article  ADS  CAS  Google Scholar 

  11. Cirri, P. et al. Eur. J. Biochem. 214, 647–657 (1993).

    Article  CAS  Google Scholar 

  12. Wo, Y. Y. et al. Biochemistry 31, 1712–1721 (1992).

    Article  CAS  Google Scholar 

  13. Zhang, Z. Y. & Van Etten, R. L. Biochemistry 30, 8954–8959 (1991).

    Article  CAS  Google Scholar 

  14. Hiraga, A. & Tzuiki, S. Adv. Prot. Phosphatases 6, 251–264 (1991).

    CAS  Google Scholar 

  15. Charbonneau, H. & Tonks, N. K. A. Rev. Cell Biol. 8, 463–493 (1992).

    Article  CAS  Google Scholar 

  16. Guan, K. L. & Dixon, J. E. J. biol. Chem. 266, 17026–17030 (1991).

    CAS  PubMed  Google Scholar 

  17. Kabsch, W. J. appl. Crystallogr. 21, 916–924 (1988).

    Article  CAS  Google Scholar 

  18. Wang, B. C. Meth. Enzym. 115, 90–112 (1985).

    Article  CAS  Google Scholar 

  19. Leslie, A. Acta crystallogr. A43, 134–135 (1987).

    Article  CAS  Google Scholar 

  20. Zhang, K. Y. J. & Main, P. Acta crystallogr. A46, 377–381 (1990).

    Article  CAS  Google Scholar 

  21. Jones, T. A. & Thirup, S. EMBO J. 5, 819–822 (1985).

    Article  Google Scholar 

  22. Jones, T. A., Bergdoll, M. & Kjeldgaard, M. in Crystallographic Computing and Modelling Methods in Molecular Design (eds Bugg, C. & Ealick, S.) (Springer, New York, 1989).

    Google Scholar 

  23. Brünger, T. A., Kuriyan, J. & Karplus, M. Science 235, 458–460 (1987).

    Article  ADS  Google Scholar 

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Su, XD., Taddei, N., Stefani, M. et al. The crystal structure of a low-molecular-weight phosphotyrosine protein phosphatase. Nature 370, 575–578 (1994). https://doi.org/10.1038/370575a0

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