Abstract
The sequence d(GGGGTTTTGGGG) from the 3' overhang of the Oxytricha telomere has been crystallized and its three-dimensional structure solved to 2.5 Å resolution. The oligonucleotide forms hairpins, two of which join to make a four-stranded helical structure with the loops containing four thymine residues at either end. The guanine residues are held together by cyclic hydrogen bonding and an ion is located in the centre. The four guanine residues in each segment have a glycosyl conformation that alternates between anti and syn. There are two four-stranded molecules in the asymmetric unit showing that the structure has some intrinsic flexibility.
This is a preview of subscription content, access via your institution
Access options
Subscribe to this journal
Receive 51 print issues and online access
$199.00 per year
only $3.90 per issue
Buy this article
- Purchase on Springer Link
- Instant access to full article PDF
Prices may be subject to local taxes which are calculated during checkout
Similar content being viewed by others
References
Blackburn, E. Nature 350, 569–572 (1991).
Klobutcher, L. A., Swanton, M. T., Donini, P. & Prescott, D. M. Proc. natn. Acad. Sci. U.S.A. 78, 3015–3019 (1981).
Henderson, E. R. & Blackburn, E. H. Molec. cell. Biol. 9, 345–348 (1989).
Lipps, H. J., Gruissem, W. & Prescott, D. M. Proc. natn. Acad Sci. U.S.A. 79, 2495–2499 (1982).
Oka, Y. & Thomas, C. A. Nucleic Acids Res. 15, 8877–8898 (1987).
Henderson, E., Hardin, C. C., Walk, S. K., Tinoco, I. & Blackburn, E. H. Cell 51, 899–908 (1987).
Cech, T. R. Nature 332, 777–778 (1988).
Lipps, H. J. Proc. natn. Acad. Sci. U.S.A. 77, 4104–4107 (1980).
Williamson, J. R., Raghuraman, M. K. & Cech, T. R. Cell 59, 871–880 (1990).
Sundquist, W. I. & Klug, A. Nature 342, 825–829 (1990).
Panyutin, I. G. et al. Proc. natn. Acad. Sci. U.S.A. 87, 867–870 (1990).
Rich, A. Biochim. biophys. Acta 29, 502–509 (1958).
Arnott, S., Chandrasekaran, R. & Marttila, C. M. Biochem. J. 141, 537–543 (1974).
Zimmerman, S. B., Cohen, G. H. & Davies, D. R. J. molec. Biol. 92, 181–192 (1975).
Gellert, M., Lipsett, M. N. & Davies, D. R. Proc. natn. Acad. Sci. U.S.A. 48, 2013–2018 (1962).
Sen, D. & Gilbert, W. Nature 334, 364–366 (1988).
Wang, Y., Jin, R., Gaffney, B., Jones, R. A. & Breslauer, K. J. Nucleic Acids Res. 19, 4619–4622 (1991).
Wang, Y. et al. J. molec. Biol. (in the press).
Smith, F. W. & Feigon, J. J. biomolec. Struct. Dynamics 8, 201 (1991).
Brunger, A. T. Acta crystallogr. A 46, 46–57 (1990).
Zimmerman, S. B. J. molec. Biol. 106, 663–672 (1976).
Brunger, A. T. X-PLOR Manual, Version 2.1 Yale University (1990).
Jones, T. A. J. appl. Crystallogr. 11, 268–276 (1978).
Pinnaraia, T. J. et al. J. Am. chem. Soc. 100, 3625–3627 (1978).
Howard, F. B. & Miles, H. T. Biochemistry 21, 6736–6745 (1982).
Williams, L. D. et al. Proc. natn. Acad. Sci. U.S.A. 87, 2225–2229 (1990).
Rich, A., Davies, D. R., Crick, F. H. C. & Watson, J. D. J. molec. Biol. 3, 71–86 (1961).
Rich, A., Nordheim, A. & Wang, A. H.-J. A. Rev. Biochem. 53, 791–846 (1984).
Hare, D. R. & Reid, B. R. Biochemistry 25, 5341–5350 (1986).
Kung, H. J. et al. Cell 1, 609–620 (1976).
Author information
Authors and Affiliations
Rights and permissions
About this article
Cite this article
Kang, C., Zhang, X., Ratliff, R. et al. Crystal structure of four-stranded Oxytricha telomeric DNA. Nature 356, 126–131 (1992). https://doi.org/10.1038/356126a0
Received:
Accepted:
Issue Date:
DOI: https://doi.org/10.1038/356126a0
This article is cited by
-
Importance of potassium ions for ribosome structure and function revealed by long-wavelength X-ray diffraction
Nature Communications (2019)
-
Computational studies on G-quadruplex DNA-stabilizing property of novel Wittig-based Schiff-Base ligands and their copper(II) complexes
Structural Chemistry (2019)
-
Temperature and pressure limits of guanosine monophosphate self-assemblies
Scientific Reports (2017)
-
Quadruplex-and-Mg2+ Connection (QMC) of DNA
Scientific Reports (2015)
-
MD simulation of LNA-modified human telomeric G-quadruplexes: a free energy calculation
Medicinal Chemistry Research (2015)
Comments
By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.