Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Article
  • Published:

Conformations of immunoglobulin hypervariable regions

Abstract

On the basis of comparative studies of known antibody structures and sequences it has been argued that there is a small repertoire of main-chain conformations for at least five of the six hypervariable regions of antibodies, and that the particular conformation adopted is determined by a few key conserved residues. These hypotheses are now supported by reasonably successful predictions of the structures of most hypervariable regions of various antibodies, as revealed by comparison with their subsequently determined structures.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Similar content being viewed by others

References

  1. Alzari, P. M., Lascombe, M.-B. & Poljak, R. J. A. Rev. Immun. 6, 555–580 (1988).

    Article  CAS  Google Scholar 

  2. Davies, D. R. & Metzger, H. A. Rev. Immun. 1, 87–117 (1983).

    Article  CAS  Google Scholar 

  3. Wu, T. T. & Kabat, E. A. J. exp. Med 132, 211–250 (1970).

    Article  CAS  Google Scholar 

  4. Jones, P. T., Dear, P. H., Foote, J., Neuberger, M. S. & Winter, G. Nature 321, 522–525 (1986).

    Article  ADS  CAS  Google Scholar 

  5. Kabat, E. A., Wu, T. T. & Bilofsky, H. J. biol. Chem. 252, 6609–6616 (1977).

    CAS  PubMed  Google Scholar 

  6. Padlan, E. A. & Davies, D. R. Proc. natn. Acad. Sci. U.S.A. 72, 819–823 (1975).

    Article  ADS  CAS  Google Scholar 

  7. de la Paz, P., Sutton, B. J., Darsley, M. J. & Rees, A. R. EMBO J. 5, 415–425 (1986).

    Article  CAS  Google Scholar 

  8. Chothia, C. & Lesk, A. M. J. molec. Biol. 196, 901–917 (1987).

    Article  CAS  Google Scholar 

  9. Chothia, C. et al. Science 233, 755–758 (1986).

    Article  ADS  CAS  Google Scholar 

  10. Poljak, R. J., Amzel, L. M., Chen, B. L., Phizackerley, R. P. & Saul, F. Proc. natn. Acad. Sci. U.S.A. 71, 3440–3444 (1974).

    Article  ADS  CAS  Google Scholar 

  11. Satow, Y., Cohen, G. H., Padlan, E. A. & Davies, D. R. J. molec. Biol. 190, 593–604 (1986).

    Article  CAS  Google Scholar 

  12. Marquart, M., Deisenhofer, J. & Huber, R. J. molec. Biol. 141, 369–391 (1980).

    Article  CAS  Google Scholar 

  13. Suh, S. E. et al. Proteins 1, 74–80 (1986).

    Article  CAS  Google Scholar 

  14. Epp, O., Latham, E., Schiffer, M., Huber, R. & Palm, W. Biochemistry 14, 4943–4952 (1975).

    Article  CAS  Google Scholar 

  15. Furey, W., Wang, B. C., Yoo, C. S. & Sax, M. J. molec. Biol 167, 661–692 (1983).

    Article  CAS  Google Scholar 

  16. Sheriff, S. et al. Proc. natn. Acad Sci. U.S.A. 84, 8075–8079 (1987).

    Article  ADS  CAS  Google Scholar 

  17. Padlan, E. A. et al. Proc. natn. Acad Sci. U.S.A. 86, 5938–5942 (1989).

    Article  ADS  CAS  Google Scholar 

  18. Colman, P. M. et al. Nature 326, 358–362 (1987).

    Article  ADS  CAS  Google Scholar 

  19. Herron, J. N., He, X.-m., Mason, M. I., Voss, E. W. & Edmundson, A. B. Proteins 5, 271–286 (1989).

    Article  CAS  Google Scholar 

  20. Bentley, G. A. et al. Cold Spring Harb. Symp. quant. Biol. Vol. LIV (in the press).

  21. Sibanda, B. L., Blundell, T. L. & Thornton, J. M. J. molec. Biol. 206, 759–777 (1989).

    Article  CAS  Google Scholar 

  22. Lesk, A, M. & Chothia, C. H. Phil. Trans. R. Soc. A317, 345–356 (1986).

    Article  ADS  CAS  Google Scholar 

  23. Summers, N. L., Carlson, W. D. & Karplus M. J. molec. Biol. 196, 175–198 (1987).

    Article  CAS  Google Scholar 

  24. Levitt, M. J. Molec. Biol. 170, 723–764 (1974).

    Article  Google Scholar 

  25. Chothia, C. & Lesk, A. M. EMBO J. 5, 823–826 (1986).

    Article  CAS  Google Scholar 

  26. Lascombe, M.-B. et al. Proc. natn. Acad Sci. U.S.A. 86, 607–611 (1989).

    Article  ADS  CAS  Google Scholar 

  27. Chothia, C. & Lesk, A. M. Trends. Biochem. Sci. 10, 116–118 (1985).

    Article  CAS  Google Scholar 

  28. Tramontano, A., Chothia, C. & Lesk, A. M. (submitted).

  29. Kabat, E. A., Wu, T. T., Reid-Miller, M., Perry, H. M. & Gottesman, K. S. Sequences of Proteins of Immunological Interest 4th edn (Public Health Service, NIH, Washington DC, 1987).

    Google Scholar 

  30. Moult, J. & James, M. N. G. Proteins 1, 146–163 (1986).

    Article  CAS  Google Scholar 

  31. Snow, M. E. & Amzel, L. M. Proteins 1, 267–279 (1986).

    Article  CAS  Google Scholar 

  32. Fine, R. M., Wang, H., Shenkin, P. S., Yarmush, D. L. & Levinthal, C. Proteins 1, 342–362 (1986).

    Article  CAS  Google Scholar 

  33. Bruccoleri, R. E. & Karplus, M. Biopolymers 26, 137–168 (1987).

    Article  CAS  Google Scholar 

  34. Bruccoleri, R. E., Haber, E. & Novotny, J. Nature 335, 564–568 (1988).

    Article  ADS  CAS  Google Scholar 

  35. Martin, A. C. R., Cheetham, J. C. & Rees, A. R. Proc. natn. Acad. Sci. U.S.A. (in the press).

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Chothia, C., Lesk, A., Tramontano, A. et al. Conformations of immunoglobulin hypervariable regions. Nature 342, 877–883 (1989). https://doi.org/10.1038/342877a0

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1038/342877a0

This article is cited by

Comments

By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing