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Sequence of an HLA-DR α-chain cDNA clone and intron-exon organization of the corresponding gene

Abstract

The HLA–DR and related antigens are the major cell-surface glycoproteins identified so far as involved in regulation of the immune response in humans1. Here we present and discuss the sequence of cloned cDNA copies of the mRNA for the HLA–DR α-chain2. The sequence is 1,195 nucleotides long, with one open reading frame encoding a 254 amino acid primary translation product. After cleavage of the signal sequence this yields a mature polypeptide of 229 residues. Four introns have been located within the corresponding genomic sequence revealing a correlation between the protein domain structure and the genomic exon organization. Analysis of the HLA–DR α-chain amino acid sequence shows a clear homology with HLA–ABC, β2-microglobulin and immunoglobulin domains.

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References

  1. Katz, D. H. & B, Benacerraf (eds) The Role of the Histocompatibility Gene Complex in Immune Response (Academic, London, 1976).

  2. Lee, J. S., Trowsdale, J. & Bodmer, W. F. Proc. natn. Acad. Sci. U.S.A. 79, 545–549 (1982).

    Article  ADS  CAS  Google Scholar 

  3. Springer, T. A., Kaufman, J. F., Terhorst, C. & Strominger, J. L. Nature 268, 213–218 (1977).

    Article  ADS  CAS  Google Scholar 

  4. Korman, A. J., Ploegh, H. L., Kaufman, J. F., Owen, M. J. & Strominger, J. L. J. exp. Meet. 152, 655–82s (1980).

    Google Scholar 

  5. Owen, M. J., Kissonerghis, A. M., Lodish, H. F. & Crumpton, M. J. J. biol. Chem. 256, 8987–8993 (1981).

    CAS  PubMed  Google Scholar 

  6. Kaufman, J. F. and Strominger, J. L. Proc. natn. Acad. Sci. U.S.A. 76, 6304–6308 (1979).

    Article  ADS  CAS  Google Scholar 

  7. Robb, R. J., Terhorst, C. & Strominger, J. L. J. biol. Chem. 253, 5319–5324 (1978).

    CAS  Google Scholar 

  8. Coligan, J. E., Kindt, T. J., Uehara, H., Martinko, J. & Nathenson, S. G. Nature 291, 35–39 (1981).

    Article  ADS  CAS  Google Scholar 

  9. Rogers, J. et al. Cell 20, 303–312 (1980).

    Article  CAS  Google Scholar 

  10. Korman, A. J., Knudsen, P. J., Kaufman, J. F. & Strominger, J. L. Proc. natn. Acad. Sci. U.S.A. 79, 1844–1848 (1982).

    Article  ADS  CAS  Google Scholar 

  11. Bodmer, W. F. Nature 237, 139–145 (1972).

    Article  ADS  CAS  Google Scholar 

  12. Gaily, J. A. & Ederman, G. M. A. Rev. Genet. 6, 1–46 (1972).

    Article  Google Scholar 

  13. Smithies, O. & Poulik, M. D. Science 175, 187–189 (1972).

    Article  ADS  CAS  Google Scholar 

  14. Peterson, P. A., Cunningham, B. A., Berggard, I. & Edelman, G. M. Proc. natn. Acad. Sci. U.S.A. 69, 1697–1701 (1972).

    Article  ADS  CAS  Google Scholar 

  15. Strominger, J. L. et al. Scand. J. Immun. 11, 573–592 (1980).

    Article  CAS  Google Scholar 

  16. Nathanson, S. G., Uehara, H., Ewenstein, B., Kindt, T. J. & Coligan, J. E. A. Rev. Biochem. 50, 1025–1052 (1981).

    Article  Google Scholar 

  17. Kratzin, H. et al. Hoppe–Seyler's Z. physiol. Chem. 362, S. 1665–1669 (1981).

    CAS  PubMed  Google Scholar 

  18. Larhammar, D. et al. Scand. J. Immun. 14, 617–622 (1981).

    Article  CAS  Google Scholar 

  19. Kaufman, J. F. & Strominger, J. L. Nature 297, 694–697 (1982).

    Article  ADS  CAS  Google Scholar 

  20. Amzel, L. M. & Poljak, R. J. A. Rev. Biochem. 48, 961–977 (1979).

    Article  CAS  Google Scholar 

  21. Dayhoff, M. O. Atlas of Protein Sequence and Structure. (National Biomedical Research Foundation, Washington DC, 1972).

    Google Scholar 

  22. Beale, D. & Feinstein, A. Quant. Rev. Biophys. 9, 135–180 (1976).

    Article  CAS  Google Scholar 

  23. Malissen, M., Malissen, B. & Jordan, B. R. Proc. natn. Acad. Sci. U.S.A. 79, 893–897 (1982).

    Article  ADS  CAS  Google Scholar 

  24. Parnes, J. & Seidman, J. G. Cell 29, 661–669 (1982).

    Article  CAS  Google Scholar 

  25. Bodmer, W. F. & Bodmer, J. G. Br. med. Bull. 34, 309–316 (1978).

    Article  CAS  Google Scholar 

  26. Jeffreys, A. J. in Genome Evolution (eds Dover, G. A. & Flavell, R. B.) 157–176 (Academic, London, 1982).

    Google Scholar 

  27. Cohen, F. E., Novotney, J., Sternberg, M. J. E., Campbell, D. G. & Williams, A. F. Biochem. J. 195, 31–40 (1981).

    Article  CAS  Google Scholar 

  28. MacLennan, I. C. M., Connell, G. E. & Gotch, F. M. Immunology 26, 303–310 (1974).

    CAS  PubMed  PubMed Central  Google Scholar 

  29. Maxam, A. M. & Gilbert, W. Meth. Enzym. 65, 499–560 (1980).

    Article  CAS  Google Scholar 

  30. Sanger, F., Nicklen, S. & Coulson, A. R. Proc. natn. Acad. Sci. U.S.A. 74, 5463–5467 (1977).

    Article  ADS  CAS  Google Scholar 

  31. Suggs, S. V., Wallace, R. B., Hirose, T., Kawashima, E. & Itakura, K. Proc. natn. Acad. Sci. U.S.A. 78, 6613–6617 (1981).

    Article  ADS  CAS  Google Scholar 

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Lee, J., Trowsdale, J., Travers, P. et al. Sequence of an HLA-DR α-chain cDNA clone and intron-exon organization of the corresponding gene. Nature 299, 750–752 (1982). https://doi.org/10.1038/299750a0

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