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Electron density images from imperfect data by iterative entropy maximization

Abstract

Information theory provides a uniquely powerful apparatus for reconstructing an image from imperfect data in its dual space. An iterative procedure based on constrained entropy maximization is presented here for reconstruction of electron density from imperfect single-crystal X-ray diffraction data. In the ideal situation, continuous electron density, its periodicity given by the lattice, is the Fourier transform of an infinite set of structure factors whose squared moduli are observables. An ideal electron density is unattainable from experiment because of the common experimental inadequacies of incomplete and noisy data discussed by Gull and Daniell1. These inadequacies are partially overcome in the present procedure which yields true super-resolution and is economical even for protein crystal structures as illustrated.

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References

  1. Gull, S. F. & Daniell, G. J. Nature 272, 686–690 (1978).

    Article  ADS  Google Scholar 

  2. Benjamin, R. IEE Proc. F127, 341–353 (1980).

    Google Scholar 

  3. Oppenheim, A. V. & Schafer, R. W. Digital Signal Processing, Ch. 3 (Prentice-Hall, New Jersey, 1975).

    MATH  Google Scholar 

  4. Jaynes, E. T. IEEE Trans. SSC- 4, 227–241 (1968).

    Google Scholar 

  5. Ramachandran, G. N. & Srinivasan, R. Fourier Methods in Crystallography (Wiley–Interscience, New York, 1970).

    Google Scholar 

  6. Ables, J. G. Astr. Astrophys. Suppl. 15, 383–393 (1974).

    ADS  Google Scholar 

  7. Jaynes, E. T. Phys. Rev. 106, 620–630 (1957).

    Article  ADS  MathSciNet  Google Scholar 

  8. Collins, D. M. Acta crystallogr. A34, 533–541 (1978).

    Article  Google Scholar 

  9. Watenpaugh, K. D., Sieker, L. C., Herriott, J. R. & Jensen, L. H. Acta crystallogr. B29, 943–956 (1973).

    Article  CAS  Google Scholar 

  10. Hubbard, C. R., Quicksall, C. O. & Jacobson, R. A. The Fast Fourier Algorithm and the Programs ALFF, ALFFDP, ALFFPROJ, ALFFT, and FRIEDEL (Ames, Iowa, 1971).

    Google Scholar 

  11. Collins, D. M., Cotton, F. A., Hazen, E. E. Jr, Meyer, E. F. Jr & Morimoto, C. N. Science 190, 1047–1053 (1975).

    Article  ADS  CAS  Google Scholar 

  12. Collins, D. M., Brice, M. D., la Cour, T. F. M. & Legg, M. J. Crystallographic Computing Techniques (eds Ahmed, F. R., Huml, K. & Sedláček, B.) 330–335 (Munksgaard, Copenhagen, 1976).

    Google Scholar 

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Collins, D. Electron density images from imperfect data by iterative entropy maximization. Nature 298, 49–51 (1982). https://doi.org/10.1038/298049a0

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