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| Open AccessRestructuring of the ‘Macaronesia’ biogeographic unit: A marine multi-taxon biogeographical approach
- Rui Freitas
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| Open AccessMulti-tissue network analysis for drug prioritization in knee osteoarthritis
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| Open AccessTranscriptome Network Analysis Identifies CXCL13-CXCR5 Signaling Modules in the Prostate Tumor Immune Microenvironment
- Adaugo Q. Ohandjo
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| Open AccessModeling the Interplay between Photosynthesis, CO2 Fixation, and the Quinone Pool in a Purple Non-Sulfur Bacterium
- Adil Alsiyabi
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| Open AccessInsights about multi-targeting and synergistic neuromodulators in Ayurvedic herbs against epilepsy: integrated computational studies on drug-target and protein-protein interaction networks
- Neha Choudhary
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| Open AccessGenerating kinetic environments to study dynamic cellular processes in single cells
- Alexander Thiemicke
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| Open AccessGenome-scale metabolic model of the rat liver predicts effects of diet restriction
- Priyanka Baloni
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| Open AccessSynergistic mechanisms of Sanghuang–Danshen phytochemicals on postprandial vascular dysfunction in healthy subjects: A network biology approach based on a clinical trial
- Yeni Lim
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| Open AccessDiscovery of food identity markers by metabolomics and machine learning technology
- Alexander Erban
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| Open AccessHyperFoods: Machine intelligent mapping of cancer-beating molecules in foods
- Kirill Veselkov
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| Open AccessGeneralization of the small-world effect on a model approaching the Erdős–Rényi random graph
- Benjamin F. Maier
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| Open AccessPredicting the decision making chemicals used for bacterial growth
- Kazuha Ashino
- , Kenta Sugano
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| Open AccessApoptotic endothelial cells release small extracellular vesicles loaded with immunostimulatory viral-like RNAs
- Marie-Pierre Hardy
- , Éric Audemard
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| Open AccessSequential conditioning-stimulation reveals distinct gene- and stimulus-specific effects of Type I and II IFN on human macrophage functions
- Quen Cheng
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- & Alexander Hoffmann
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| Open AccessCausal relationship between local field potential and intrinsic optical signal in epileptiform activity in vitro
- Zsigmond Benkő
- , Kinga Moldován
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| Open AccessMulti-scale stochastic organization-oriented coarse-graining exemplified on the human mitotic checkpoint
- Richard Henze
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| Open AccessUnderstanding carbon utilization routes between high and low starch-producing cultivars of cassava through Flux Balance Analysis
- Porntip Chiewchankaset
- , Wanatsanan Siriwat
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| Open AccessThe impact of estimated tumour purity on gene expression-based drug repositioning of Clear Cell Renal Cell Carcinoma samples
- Karel K. M. Koudijs
- , Anton G. T. Terwisscha van Scheltinga
- & Henk-Jan Guchelaar
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| Open AccessSystematic Analysis and Biomarker Study for Alzheimer’s Disease
- Xinzhong Li
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| Open AccessMetabolomics and transcriptomics pathway approach reveals outcome-specific perturbations in COPD
- Charmion I. Cruickshank-Quinn
- , Sean Jacobson
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| Open AccessUnlocking conserved and diverged metabolic characteristics in cassava carbon assimilation via comparative genomics approach
- Wanatsanan Siriwat
- , Saowalak Kalapanulak
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| Open AccessA novel system-level approach using RNA-sequencing data identifies miR-30-5p and miR-142a-5p as key regulators of apoptosis in myocardial infarction
- Jin Ock Kim
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| Open AccessIntegration of Molecular Interactome and Targeted Interaction Analysis to Identify a COPD Disease Network Module
- Amitabh Sharma
- , Maksim Kitsak
- & Edwin K. Silverman
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| Open AccessCharacterization of different fat depots in NAFLD using inflammation-associated proteome, lipidome and metabolome
- Alen Lovric
- , Marit Granér
- & Jan Boren
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| Open AccessDoxorubicin induces an extensive transcriptional and metabolic rewiring in yeast cells
- Hilal Taymaz-Nikerel
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| Open AccessDetermining Relative Dynamic Stability of Cell States Using Boolean Network Model
- Jae Il Joo
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| Open AccessIntegrative analysis of the inter-tumoral heterogeneity of triple-negative breast cancer
- Alec M. Chiu
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| Open AccessNMR-based Metabolomic Techniques Identify the Toxicity of Emodin in HepG2 Cells
- Chang Chen
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| Open AccessUncovering global metabolic response to cordycepin production in Cordyceps militaris through transcriptome and genome-scale network-driven analysis
- Nachon Raethong
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| Open AccessPersonalised drug repositioning for Clear Cell Renal Cell Carcinoma using gene expression
- Karel K. M. Koudijs
- , Anton G. T. Terwisscha van Scheltinga
- & Henk-Jan Guchelaar
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| Open AccessTopological estimation of signal flow in complex signaling networks
- Daewon Lee
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| Open AccessParallel opsin switches in multiple cone types of the starry flounder retina: tuning visual pigment composition for a demersal life style
- Ilaria Savelli
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| Open AccessCost-effective generation of precise label-free quantitative proteomes in high-throughput by microLC and data-independent acquisition
- Jakob Vowinckel
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| Open AccessA metabolomics study of Qiliqiangxin in a rat model of heart failure: a reverse pharmacology approach
- Junzeng Fu
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| Open AccessSystemic Homeostasis in Metabolome, Ionome, and Microbiome of Wild Yellowfin Goby in Estuarine Ecosystem
- Feifei Wei
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| Open AccessTranscription Factor Target Gene Network governs the Logical Abstraction Analysis of the Synthetic Circuit in Leishmaniasis
- Milsee Mol
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| Open AccessGenome-scale analysis of Methicillin-resistant Staphylococcus aureus USA300 reveals a tradeoff between pathogenesis and drug resistance
- Donghui Choe
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| Open AccessComputational trans-omics approach characterised methylomic and transcriptomic involvements and identified novel therapeutic targets for chemoresistance in gastrointestinal cancer stem cells
- Masamitsu Konno
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| Open AccessFind_tfSBP: find thermodynamics-feasible and smallest balanced pathways with high yield from large-scale metabolic networks
- Zixiang Xu
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- & Dunming Zhu
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| Open AccessIdentification of a gene signature for discriminating metastatic from primary melanoma using a molecular interaction network approach
- Rahul Metri
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- & Nagasuma Chandra
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| Open AccessModeling of the jasmonate signaling pathway in Arabidopsis thaliana with respect to pathophysiology of Alternaria blight in Brassica
- Rajesh Kumar Pathak
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| Open AccessGenome-scale modeling and transcriptome analysis of Leuconostoc mesenteroides unravel the redox governed metabolic states in obligate heterofermentative lactic acid bacteria
- Lokanand Koduru
- , Yujin Kim
- & Dong-Yup Lee
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| Open AccessMCM2-regulated functional networks in lung cancer by multi-dimensional proteomic approach
- Chantal Hoi Yin Cheung
- , Chia-Lang Hsu
- & Hsueh-Fen Juan
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| Open AccessDrug repurposing in idiopathic pulmonary fibrosis filtered by a bioinformatics-derived composite score
- E. Karatzas
- , M. M. Bourdakou
- & G. M. Spyrou
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| Open AccessModelling compartmentalization towards elucidation and engineering of spatial organization in biochemical pathways
- Govind Menon
- , Chinedu Okeke
- & J. Krishnan
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| Open AccessOscillatory dynamics of p38 activity with transcriptional and translational time delays
- Yuan Zhang
- , Haihong Liu
- & Jin Zhou
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| Open AccessLipidomic Signatures of Nonhuman Primates with Radiation-Induced Hematopoietic Syndrome
- Evan L. Pannkuk
- , Evagelia C. Laiakis
- & Albert J. Fornace
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| Open AccessIntegrative Approach with Electrophysiological and Theoretical Methods Reveals a New Role of S4 Positively Charged Residues in PKD2L1 Channel Voltage-Sensing
- Tomohiro Numata
- , Kunichika Tsumoto
- & Yasuo Mori